CCCCCGCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAGAA
TCCGCGGAATTCATCATGTTATCATCTAATTATTGTCAAAACAATTTGCT
CATTATGTTTAACTAAAGCCTTCTGGCTGCTGTGTGACCATAATCCCTGT
AATTCCCTCAACAATCACATTAAATATGGAATGTCCATTGGCATCCACTC
AGCTGCCTTCAGCTCTCATGGCAGACGAGCATTGGTCACATTTGTCCGTC
ATCCAGCCGGGACCTTCCTGATCCCACAGTTGGAAAAAGAGAGGGTTGAA
GTGACTTCTGAGATATGAAGCTGTCTAGTATTTTCTCATGTCAGGGCATG
CAAACAAGCATGTATTTTACAGAAAGAATCTTGTTATGTAACCCAGGCTG
GGTTTGAACTCATGAACCACCTGCCAAAGCCTCCCAAATATTGAGATAAT
AAACACAGGACAACTATGCCCATCTATCGGCACCTTTAAACTTTGCTGGG
ATAGTGAGGGAAATAGAGAAGACAGAAAGCATTTCTTGGCTATAAATCTG
TTTTTAAATCATCAGAGAGAGGAGACACAGAATAACTAGAAGGCCCTTGT
AACACCACAAGAAAGGATGTGTGTTATGGAAGAACATTTGCTGGCCCATT
GAGACACAGGGCTATTGATACCCAGGAGTTGAGGGACCTGCATCAAGAAT
TCTCAGCTTTTGAGTTCAATGTCCTAATAGGGAGATCAAAGTTCCTTTTT
CTCTG

NNNNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCAAATCCTGCCTGCTCTCCCTC
CTCTCTGGCAGCCTAGCTTTCCTGCAGTCATCAACATTTCTTGCTCCAGT
CCCCACCAAGGCCTTACTGCCTAGATAGGCATTCATGATATTCTTAACCC
ATCCCTGGATCACTCAGTTGGATGGTTCATCAAAACATTGAAACTTGAAG
CTTCCTACACACACTGGGCAAGGCTGGACACAGTATCCCTTCTGCTTACA
AGGTTCCAGCTGGCCTAACAGCCCATCCTCTCATTTCTACCACCTGCTAG
AAGGTCTCCTTTCACTGCCCTCTATTTTGTGCATATCTAATTACATTGCC
TGTGTTGATTCCTTTATTCCACTCCTCCTCTGCATAGCCCTGTGCTGAGG
GTAAAGTCAGCATACATGCAAGGTGTGTGCATGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGNNNNNNNNNNNNNTATNNNTNNNNNNNTTGTTT
GNTNTNNNTTTTNTNTTTNNNNNNTTTTTTTTTTTTTTTNTTTTTTTTTT
TTTTTTTTTNTTTNNTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTN
NNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTNNTTTN
NTTTTTTTTTTTNTTTTTNTTTTTTTTTTTTTNNTTTTTTTTTNTTTTTT
TTTTTTNTNNTTTTNTTTNTN

Query= MSMg01no427_a19.b1 MSMg01no427_a19.b1 CHROMAT_FILE:
MSMg01no427_a19.b1 PHD_FILE: MSMg01no427_a19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:48 2005
         (596 letters)



>mm_chr3_98130959_98131954
          Length = 996

 Score = 1106 bits (572), Expect = 0.0
 Identities = 590/596 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttattgtcaaaacaatttgctcattatgtttaactaaagccttctggctgctgtgtgacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttattgtcaaaacaatttgctcattatgtttaactaaagccttctggctgctgtgtgacc 260

                                                                       
Query: 61  ataatccctgtaattccctcaacaatcacattaaatatggaatgtccattggcatccact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataatccctgtaattccctcaacaatcacattaaatatggaatgtccattggcatccact 320

                                                                       
Query: 121 cagctgccttcagctctcatggcagacgagcattggtcacatttgtccgtcatccagccg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 321 cagctgccttcagctctcatggcagacgagcattggtcacatttgtccgtcatccagcca 380

                                                                       
Query: 181 ggaccttcctgatcccacagttggaaaaagagagggttgaagtgacttctgagatatgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaccttcctgatcccacagttggaaaaagagagggttgaagtgacttctgagatatgaa 440

                                                                       
Query: 241 gctgtctagtattttctcatgtcagggcatgcaaacaagcatgtattttacagaaagaat 300
           ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctgtctagtaatttctcatatcagggcatgcaaacaagcatgtattttacagaaagaat 500

                                                                       
Query: 301 cttgttatgtaacccaggctgggtttgaactcatgaaccacctgccaaagcctcccaaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttgttatgtaacccaggctgggtttgaactcatgaaccacctgccaaagcctcccaaat 560

                                                                       
Query: 361 attgagataataaacacaggacaactatgcccatctatcggcacctttaaactttgctgg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attgagataataaacacaggacaactatgcccatctatcggcacctttaaactttgctgg 620

                                                                       
Query: 421 gatagtgagggaaatagagaagacagaaagcatttcttggctataaatctgtttttaaat 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 621 gatagtgagggaaatagagaagacagaaagcatttcttggctataaatctgtttttgaat 680

                                                                       
Query: 481 catcagagagaggagacacagaataactagaaggcccttgtaacaccacaagaaaggatg 540
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 681 catcagagagaggagacacagaataactagaagtcccttgtaacaccacaagaaaggatg 740

                                                                   
Query: 541 tgtgttatggaagaacatttgctggcccattgagacacagggctattgatacccag 596
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 741 tgtgttatggaagaacatttgctggcccattgagacacagggctattgacacccag 796


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space:   577796
Effective search space used:   577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)