Query= MSMg01no428_e24.b1 MSMg01no428_e24.b1 CHROMAT_FILE:
MSMg01no428_e24.b1 PHD_FILE: MSMg01no428_e24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:27 2005
(570 letters)
>mm_chr3_23490343_23491312
Length = 970
Score = 1064 bits (550), Expect = 0.0
Identities = 565/570 (99%)
Strand = Plus / Plus
Query: 1 gaaagaggtcaaaaaatcagtatatttatcaccatattaatgcactggcatgtttatagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaaagaggtcaaaaaatcagtatatttatcaccatattaatgcactggcatgtttatagc 260
Query: 61 cctgcacatgtttgaatgccaaaatgcaagactttgtgattaattgtctgcttaaattgt 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgcacatgtttgaatggcaaaatgcaagactttgtgattaattgtctgcttaaattgt 320
Query: 121 ttgtacaaaatattgtcattgaagctagagtcctctgttttggatagtcctgacggttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtacaaaatattgtcattgaagctagagtcctctgttttggatagtcctgacggttcc 380
Query: 181 cttctctgcctcacagttctgggattacagggacacaaggccatttccagctctttccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttctctgcctcacagttctgggattacagggacacaaggccatttccagctctttccta 440
Query: 241 catgctggtaatctttacttaggtctccttccttgcacagccagaattttacccactgag 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catgctggtaatccaaacttaggtctccttccttgcacagccagaattttacccactgag 500
Query: 301 ccatgctctcccaataatgcacaaatcttacaatctattcttccccatagtctttaagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccatgctctcccaataatgcacaaatcttacaatctattcttccccatagtctttaagta 560
Query: 361 tcttagctgttacatgcagcaaatgtattttgtacctattatgccattccatttggattc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 561 tcttagctgttacatgcagcaaatgtattttgtacctattatgccattccatttagattc 620
Query: 421 ataaatccctccttttaaataattttactaaaaatttggcttatcttattatttctgttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataaatccctccttttaaataattttactaaaaatttggcttatcttattatttctgttt 680
Query: 481 taataacttattttgtcctaaaatgactaatggtttttattctgtaatgaatgttttaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taataacttattttgtcctaaaatgactaatggtttttattctgtaatgaatgttttaag 740
Query: 541 ctattgaattatgccttaaagtgctgtctt 570
||||||||||||||||||||||||||||||
Sbjct: 741 ctattgaattatgccttaaagtgctgtctt 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no428_e24.g1 MSMg01no428_e24.g1 CHROMAT_FILE:
MSMg01no428_e24.g1 PHD_FILE: MSMg01no428_e24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:27 2005
(524 letters)
>mm_chr3_23687893_23688816
Length = 924
Score = 551 bits (285), Expect = e-161
Identities = 303/309 (98%), Gaps = 1/309 (0%)
Strand = Plus / Minus
Query: 217 atacaaaatatcagaaaagaaactccacaagacatctcatagttaaaacactaactatac 276
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 924 atacaaaatatcagaaaagaaactccacaagacacctcatagttagaacactaactatac 865
Query: 277 tgaagaaacaggtagtaataaaagcttgaaaataaaagttccatttaaatgaaaaaccgt 336
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 864 tgaagaaacaggtagtaataaaagcttgaaaataaaagttccatttaaatgaaaaaccat 805
Query: 337 cagaataactgtttttatcaaatcaaacttcaaaaagccacaagaacatgaagcaatata 396
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 804 cagaataactgtttttatcaaatgaaacttcaaaaagccacaagaacatgaagcaatata 745
Query: 397 atccaagctttaaaagagg-aaaaaaattcattgacaccaacaggctaaaaaaaatttgt 455
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 744 atccaagctttaaaagaggaaaaaaaattcaatgacaccaacaggctaaaaaaaatttgt 685
Query: 456 tccacaaaccaaccatcaaaagaatacttgaaaaaattctatagattaaacagtatactg 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tccacaaaccaaccatcaaaagaatacttgaaaaaattctatagattaaacagtatactg 625
Query: 516 agtatagtc 524
|||||||||
Sbjct: 624 agtatagtc 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space: 469796
Effective search space used: 469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
