Query= MSMg01no428_k02.b1 MSMg01no428_k02.b1 CHROMAT_FILE:
MSMg01no428_k02.b1 PHD_FILE: MSMg01no428_k02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:52 2005
(246 letters)
>mm_chr3_117601125_117601770
Length = 646
Score = 474 bits (245), Expect = e-138
Identities = 245/245 (100%)
Strand = Plus / Minus
Query: 1 tgtctgtgtgtccttctgtgtcctgtcagtccttcacctccctgctaaggccccactcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtctgtgtgtccttctgtgtcctgtcagtccttcacctccctgctaaggccccactcta 386
Query: 61 gttataccctgatctgtcaatttgatatggccatgtgagatcatctgtgggtttgtgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gttataccctgatctgtcaatttgatatggccatgtgagatcatctgtgggtttgtgtat 326
Query: 121 attgtctaatttttgtcttactttcaatcagaaaattctttcattttctaggatttttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attgtctaatttttgtcttactttcaatcagaaaattctttcattttctaggatttttat 266
Query: 181 tcctgtatcattttagcatcagagatgtataagcacattgaagctaatgaggggtcaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcctgtatcattttagcatcagagatgtataagcacattgaagctaatgaggggtcaggg 206
Query: 241 tgatg 245
|||||
Sbjct: 205 tgatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no428_k02.g1 MSMg01no428_k02.g1 CHROMAT_FILE:
MSMg01no428_k02.g1 PHD_FILE: MSMg01no428_k02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:52 2005
(408 letters)
>mm_chr3_117446578_117447385
Length = 808
Score = 669 bits (346), Expect = 0.0
Identities = 401/442 (90%), Gaps = 36/442 (8%)
Strand = Plus / Plus
Query: 1 tttgtgtagctctgtaccctattttttaatagggtcatttgattttttaaaagtaggtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 tttgtgtagctctgtaccctattttttaatagggtcatttgattttttaaaagtaggtaa 226
Query: 61 tatatatatatatatatatatata----------------------------------ta 86
|||||||||||||||||||||||| ||
Sbjct: 227 tatatatatatatatatatatatatatatatatatatatatatatatatatatatattta 286
Query: 87 tacccatatggttcataaatgacttataaacagggaccttttgtaagaaatactatctga 146
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tacccaaatggttcataaatgacttataaacagggaccttttgtaagaaatactatctga 346
Query: 147 agcagggtggtttatccaaatgcagctgtaacaatgtctggcagtctcttatttgacctt 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 agcagggtggtttatccaaatgcagctgtaacaatgtctggcagtctcttatttgacctt 406
Query: 207 gagaatcatcatctatgccaggcagtggtggcgtatgtttttaatcccagcacttgggag 266
||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 407 gagaatcatcatctatgccaggcagtggtggcgcatgcctttaatcccagcacttgggag 466
Query: 267 gcagagtcaggcagatttctgagtttgaggccaatctggtctacagagtgggttccagga 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gcagagtcaggcagatttctgagtttgaggccaatctggtctacagagtgggttccagga 526
Query: 327 catccaggactacacaactacagagagaaactctgactcgtaaaactaatgagagagaga 386
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 527 catccaggactacacaactacacagagaaactctgactcgtaaaactaatgagagagaga 586
Query: 387 gagagagagagagag--ggagg 406
||||||||||||||| |||||
Sbjct: 587 gagagagagagagagagggagg 608
Score = 58.7 bits (30), Expect = 7e-13
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 59 aatatatatatatatatatatatatatata 88
||||||||||||||||||||||||||||||
Sbjct: 284 aatatatatatatatatatatatatatata 255
Score = 56.8 bits (29), Expect = 3e-12
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 60 atatatatatatatatatatatatatata 88
|||||||||||||||||||||||||||||
Sbjct: 255 atatatatatatatatatatatatatata 227
Score = 56.8 bits (29), Expect = 3e-12
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 60 atatatatatatatatatatatatatata 88
|||||||||||||||||||||||||||||
Sbjct: 257 atatatatatatatatatatatatatata 229
Score = 56.8 bits (29), Expect = 3e-12
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 60 atatatatatatatatatatatatatata 88
|||||||||||||||||||||||||||||
Sbjct: 259 atatatatatatatatatatatatatata 231
Score = 56.8 bits (29), Expect = 3e-12
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 60 atatatatatatatatatatatatatata 88
|||||||||||||||||||||||||||||
Sbjct: 261 atatatatatatatatatatatatatata 233
Score = 56.8 bits (29), Expect = 3e-12
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 60 atatatatatatatatatatatatatata 88
|||||||||||||||||||||||||||||
Sbjct: 263 atatatatatatatatatatatatatata 235
Score = 56.8 bits (29), Expect = 3e-12
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 60 atatatatatatatatatatatatatata 88
|||||||||||||||||||||||||||||
Sbjct: 265 atatatatatatatatatatatatatata 237
Score = 56.8 bits (29), Expect = 3e-12
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 60 atatatatatatatatatatatatatata 88
|||||||||||||||||||||||||||||
Sbjct: 267 atatatatatatatatatatatatatata 239
Score = 56.8 bits (29), Expect = 3e-12
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 60 atatatatatatatatatatatatatata 88
|||||||||||||||||||||||||||||
Sbjct: 269 atatatatatatatatatatatatatata 241
Score = 56.8 bits (29), Expect = 3e-12
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 60 atatatatatatatatatatatatatata 88
|||||||||||||||||||||||||||||
Sbjct: 271 atatatatatatatatatatatatatata 243
Score = 56.8 bits (29), Expect = 3e-12
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 60 atatatatatatatatatatatatatata 88
|||||||||||||||||||||||||||||
Sbjct: 273 atatatatatatatatatatatatatata 245
Score = 56.8 bits (29), Expect = 3e-12
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 60 atatatatatatatatatatatatatata 88
|||||||||||||||||||||||||||||
Sbjct: 275 atatatatatatatatatatatatatata 247
Score = 56.8 bits (29), Expect = 3e-12
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 60 atatatatatatatatatatatatatata 88
|||||||||||||||||||||||||||||
Sbjct: 277 atatatatatatatatatatatatatata 249
Score = 56.8 bits (29), Expect = 3e-12
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 60 atatatatatatatatatatatatatata 88
|||||||||||||||||||||||||||||
Sbjct: 279 atatatatatatatatatatatatatata 251
Score = 56.8 bits (29), Expect = 3e-12
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 60 atatatatatatatatatatatatatata 88
|||||||||||||||||||||||||||||
Sbjct: 281 atatatatatatatatatatatatatata 253
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 60 atatatatatatatatatatatatatat 87
||||||||||||||||||||||||||||
Sbjct: 253 atatatatatatatatatatatatatat 226
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 95
Number of extensions: 34
Number of successful extensions: 34
Number of sequences better than 10.0: 1
Number of HSP's gapped: 30
Number of HSP's successfully gapped: 17
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
