MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-428M10
Chromosome	3 (Build37)
Map Location	106,592,745 - 106,592,844
singlet/doublet	singlet
Overlap gene	Cd53
Upstream gene	Rap1a, EG433637, Adora3, I830077J02Rik, Atp5f1, Wdr77, Ovgp1, 1700027A23Rik, LOC100043591, Bclp2, LOC100043594, LOC670819, LOC100043129, Chia, Chi3l3, Chi3l4, EG624696, BC051070, 2010016I18Rik, Dennd2d, Cept1, Tmem77, LOC100043608, 4933421E11Rik
Downstream gene	Olfr266, Kcna3, AI504432, Kcna2, Kcna10, Gm131, A630076J17Rik, Prok1, Hbxip, Slc16a4, Rbm15, LOC383901, Kcnc4, Slc6a17, Ubl4b, Alx3, 6330569M22Rik, Ahcyl1, Csf1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Rap1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109905 MGI:97852
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG433637 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433637 MGI:3648206
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Adora3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11542 MGI:104847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	I830077J02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433638 MGI:3588284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp5f1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11950 MGI:1100495
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wdr77 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70465 MGI:1917715
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ovgp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12659 MGI:106661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700027A23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76420 MGI:1923670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043591 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043591
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Bclp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229687 MGI:2676649
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043594 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043594
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 66 ESTs

name	LOC670819 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670819
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins pseudo : _no_value

name	LOC100043129 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043129
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins

name	Chia (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81600 MGI:1932052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chi3l3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12655 MGI:1330860
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chi3l4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104183 MGI:1341098
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG624696 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624696 MGI:3648401
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 11 Proteins pseudo : _no_value

name	BC051070 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229688 MGI:2682303
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2010016I18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69206 MGI:1916456
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Dennd2d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72121 MGI:2181193
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cept1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:99712 MGI:2139793
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem77 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67171 MGI:1914421
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100043608 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043608
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	4933421E11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:321000 MGI:2445214
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Cd53 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12508 MGI:88341
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr266 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258482 MGI:3030100
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcna3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16491 MGI:96660
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AI504432 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229694 MGI:2139742
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcna2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16490 MGI:96659
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcna10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242151 MGI:3037820
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm131 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229697 MGI:2684977
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 28 ESTs, 12 Proteins

name	A630076J17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319929 MGI:2442999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	Prok1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:246691 MGI:2180370
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hbxip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68576 MGI:1915826
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 179 ESTs, 3 Proteins

name	Slc16a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229699 MGI:2385183
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbm15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229700 MGI:2443205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383901 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 8 Proteins pseudo : _no_value

name	Kcnc4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:99738 MGI:96670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc6a17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229706 MGI:2442535
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ubl4b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67591 MGI:1914841
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Alx3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11694 MGI:1277097
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6330569M22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229707 MGI:2443884
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ahcyl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229709 MGI:2385184
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Csf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12977 MGI:1339753
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rap1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365908 GeneID:109905 MGI:97852
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAS-related protein-1a transcript_id : NM_145541.4

name	EG433637 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369837 GeneID:433637 MGI:3648206
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : predicted gene, EG433637 transcript_id : XM_489019.3

name	Adora3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371336 GeneID:11542 MGI:104847
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adenosine A3 receptor transcript_id : NM_027025.2

name	Adora3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384209 GeneID:11542 MGI:104847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adenosine A3 receptor transcript_id : NM_009631.3

name	I830077J02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359484 GeneID:433638 MGI:3588284
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA I830077J02 gene transcript_id : NM_001033780.2

name	Atp5f1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357222 GeneID:11950 MGI:1100495
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 1 transcript_id : NM_009725.3

name	Wdr77 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31541912 GeneID:70465 MGI:1917715
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 77 transcript_id : NM_027432.3

name	Ovgp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328545 GeneID:12659 MGI:106661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oviductal glycoprotein 1 transcript_id : NM_007696.2

name	1700027A23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384234 GeneID:76420 MGI:1923670
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700027A23 gene transcript_id : NM_029604.2

name	LOC100043591 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251424 GeneID:100043591
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043591 transcript_id : XM_001480809.1

name	Bclp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249100 GeneID:229687 MGI:2676649
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chitinase like protein 2 transcript_id : NM_001080816.1

name	LOC100043594 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251426 GeneID:100043594
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 66 ESTs product : similar to RIKEN cDNA 1810022K09 gene transcript_id : XM_001480813.1

name	LOC100043129 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251352 GeneID:100043129
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins product : similar to hCG2040565 transcript_id : XM_001479553.1

name	Chia (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27754135 GeneID:81600 MGI:1932052
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chitinase, acidic transcript_id : NM_023186.3

name	Chi3l3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753415 GeneID:12655 MGI:1330860
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chitinase 3-like 3 transcript_id : NM_009892.1

name	Chi3l4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21553078 GeneID:104183 MGI:1341098
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chitinase 3-like 4 transcript_id : NM_145126.1

name	BC051070 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341514 GeneID:229688 MGI:2682303
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC051070 transcript_id : NM_178412.2

name	Dennd2d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037276 GeneID:72121 MGI:2181193
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DENN/MADD domain containing 2D transcript_id : NM_028110.1

name	Cept1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365741 GeneID:99712 MGI:2139793
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : choline/ethanolaminephosphotransferase 1 transcript_id : NM_133869.3

name	Tmem77 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70980524 GeneID:67171 MGI:1914421
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 77 transcript_id : NM_026013.2

name	Tmem77 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70980525 GeneID:67171 MGI:1914421
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 77 transcript_id : NM_001025582.1

name	LOC100043608 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251429 GeneID:100043608
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : similar to Pro-Pol-dUTPase polyprotein; RNaseH; dUTPase; integrase; protease; reverse transcriptase transcript_id : XM_001480829.1

name	4933421E11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87162471 GeneID:321000 MGI:2445214
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933421E11 gene transcript_id : NM_001039478.1

name	4933421E11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87162473 GeneID:321000 MGI:2445214
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933421E11 gene transcript_id : NM_001039488.1

name	4933421E11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87162479 GeneID:321000 MGI:2445214
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933421E11 gene transcript_id : NM_028081.2

name	Cd53 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19745182 GeneID:12508 MGI:88341
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD53 antigen transcript_id : NM_007651.2

name	Olfr266 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33239315 GeneID:258482 MGI:3030100
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 266 transcript_id : NM_146489.1

name	Kcna3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680515 GeneID:16491 MGI:96660
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, shaker-related subfamily, member 3 transcript_id : NM_008418.1

name	Kcna2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369063 GeneID:16490 MGI:96659
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, shaker-related subfamily, member 2 transcript_id : NM_008417.3

name	Kcna10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487278 GeneID:242151 MGI:3037820
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, shaker-related subfamily, member 10 transcript_id : NM_001081140.1

name	Gm131 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369788 GeneID:229697 MGI:2684977
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 28 ESTs, 12 Proteins product : gene model 131, (NCBI), transcript variant 1 transcript_id : XM_131138.6

name	A630076J17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251431 GeneID:319929 MGI:2442999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : RIKEN cDNA A630076J17 gene transcript_id : XM_001480843.1

name	Prok1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117676356 GeneID:246691 MGI:2180370
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prokineticin 1 transcript_id : NM_001044382.1

name	Hbxip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251433 GeneID:68576 MGI:1915826
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 177 ESTs, 3 Proteins product : hepatitis B virus x interacting protein transcript_id : XM_001480844.1

name	Hbxip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251435 GeneID:68576 MGI:1915826
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 49 ESTs product : hepatitis B virus x interacting protein transcript_id : XM_001480846.1

name	Slc16a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122664 GeneID:229699 MGI:2385183
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 16 (monocarboxylic acid transporters), member 4 transcript_id : NM_146136.1

name	Rbm15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249065 GeneID:229700 MGI:2443205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding motif protein 15 transcript_id : NM_001045807.1

name	Kcnc4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130234 GeneID:99738 MGI:96670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage gated channel, Shaw-related subfamily, member 4 transcript_id : NM_145922.2

name	Slc6a17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370279 GeneID:229706 MGI:2442535
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 6 (neurotransmitter transporter), member 17 transcript_id : NM_172271.2

name	Ubl4b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802043 GeneID:67591 MGI:1914841
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-like 4B transcript_id : NM_026261.2

name	Alx3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802244 GeneID:11694 MGI:1277097
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aristaless 3 transcript_id : NM_007441.2

name	6330569M22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956343 GeneID:229707 MGI:2443884
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6330569M22 gene transcript_id : NM_153563.1

name	Ahcyl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922632 GeneID:229709 MGI:2385184
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S-adenosylhomocysteine hydrolase-like 1 transcript_id : NM_145542.3

name	Csf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227199 GeneID:12977 MGI:1339753
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : colony stimulating factor 1 (macrophage) transcript_id : NM_007778.3

name	EG433637 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51708339 GeneID:433637 MGI:3648206
definition	codon_start : 1 product : hypothetical protein protein_id : XP_489019.1

name	Adora3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347604 CCDS:CCDS17712.1 GeneID:11542 MGI:104847
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IMP]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0001613 - A3 adenosine receptor activity, G-protein coupled [Evidence IMP]; GO:0001609 - adenosine receptor activity, G-protein coupled [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; G-protein coupled receptor 2 product : adenosine A3 receptor isoform 1 protein_id : NP_033761.2

name	Adora3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46430764 GeneID:11542 MGI:104847
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IMP]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0001613 - A3 adenosine receptor activity, G-protein coupled [Evidence IMP]; GO:0001609 - adenosine receptor activity, G-protein coupled [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2; G-protein coupled receptor 2 product : adenosine A3 receptor isoform 2 protein_id : NP_081301.1

name	I830077J02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702091 CCDS:CCDS17713.1 GeneID:433638 MGI:3588284
definition	codon_start : 1 product : hypothetical protein LOC433638 protein_id : NP_001028952.1

name	Atp5f1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78214312 CCDS:CCDS17714.1 GeneID:11950 MGI:1100495
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0015078 - hydrogen ion transporter activity [Evidence IEA]; GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA] GO_process : GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 1 protein_id : NP_033855.2

name	Wdr77 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19263322 CCDS:CCDS17715.1 GeneID:70465 MGI:1917715
definition	codon_start : 1 product : WD repeat domain 77 protein_id : NP_081708.1

name	Ovgp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468849 CCDS:CCDS17716.1 GeneID:12659 MGI:106661
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004568 - chitinase activity [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0006032 - chitin catabolism [Evidence IEA]; GO:0007338 - fertilization (sensu Metazoa) [Evidence IEA] codon_start : 1 note : chitinase 5; oviduct-specific glycoprotein; oviductin; oviductal glycoprotein 1, 120kD; mucin 9; oviduct glycoprotein OGP product : oviductal glycoprotein 1 protein_id : NP_031722.1

name	1700027A23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037441 GeneID:76420 MGI:1923670
definition	codon_start : 1 product : hypothetical protein LOC76420 protein_id : NP_083880.1

name	LOC100043591 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251425 GeneID:100043591
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480859.1

name	Bclp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249101 GeneID:229687 MGI:2676649
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004568 - chitinase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0006032 - chitin catabolism [Evidence IEA] codon_start : 1 product : chitinase like protein_id : NP_001074285.1

name	LOC100043594 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251427 GeneID:100043594
definition	codon_start : 1 product : similar to RIKEN cDNA 1810022K09 gene protein_id : XP_001480863.1

name	LOC100043129 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251353 GeneID:100043129
definition	codon_start : 1 product : similar to hCG2040565 protein_id : XP_001479603.1

name	Chia (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754136 GeneID:81600 MGI:1932052
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence ISS] GO_function : GO:0043169 - cation binding [Evidence IEA]; GO:0008061 - chitin binding [Evidence IEA] [Evidence ISS]; GO:0004568 - chitinase activity [Evidence IDA] [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]; GO:0003796 - lysozyme activity [Evidence ISS]; GO:0005529 - sugar binding [Evidence ISS] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0006037 - cell wall chitin metabolism [Evidence ISS]; GO:0006032 - chitin catabolism [Evidence IDA] [Evidence ISS]; GO:0006030 - chitin metabolism [Evidence IEA]; GO:0007586 - digestion [Evidence ISS]; GO:0006955 - immune response [Evidence ISS]; GO:0000272 - polysaccharide catabolism [Evidence IEA]; GO:0001101 - response to acid [Evidence ISS]; GO:0009620 - response to fungus [Evidence ISS] codon_start : 1 note : acidic chitinase product : putative chitinase precursor protein_id : NP_075675.2

name	Chi3l3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753416 CCDS:CCDS17718.1 GeneID:12655 MGI:1330860
definition	GO_component : GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA] GO_function : GO:0004563 - beta-N-acetylhexosaminidase activity [Evidence IDA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0008061 - chitin binding [Evidence IEA]; GO:0004568 - chitinase activity [Evidence IDA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]; GO:0005529 - sugar binding [Evidence TAS] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0006032 - chitin catabolism [Evidence IEA]; GO:0006954 - inflammatory response [Evidence TAS] codon_start : 1 exception : mismatches in translation note : eosinophil chemotactic factor-L product : chitinase 3-like 3 protein_id : NP_034022.1

name	Chi3l4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21553079 CCDS:CCDS17719.1 GeneID:104183 MGI:1341098
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004568 - chitinase activity [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0006032 - chitin catabolism [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA] codon_start : 1 exception : mismatches in translation product : chitinase 3-like 4 protein_id : NP_660108.1

name	BC051070 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30410738 CCDS:CCDS17720.1 GeneID:229688 MGI:2682303
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004568 - chitinase activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0006032 - chitin catabolism [Evidence IEA] codon_start : 1 product : hypothetical protein LOC229688 protein_id : NP_848499.1

name	Dennd2d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037277 CCDS:CCDS17722.1 GeneID:72121 MGI:2181193
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : DENN/MADD domain containing 2D isoform 1 protein_id : NP_082386.1

name	Cept1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559983 CCDS:CCDS17723.1 GeneID:99712 MGI:2139793
definition	GO_component : GO:0005789 - endoplasmic reticulum membrane [Evidence IDA] GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : choline/ethanolaminephosphotransferase 1 protein_id : NP_598630.2

name	Tmem77 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313106 CCDS:CCDS17725.1 GeneID:67171 MGI:1914421
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC67171 isoform 2 protein_id : NP_080289.1

name	Tmem77 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70980526 CCDS:CCDS17724.1 GeneID:67171 MGI:1914421
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC67171 isoform 1 protein_id : NP_001020753.1

name	LOC100043608 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251430 GeneID:100043608
definition	codon_start : 1 product : similar to Pro-Pol-dUTPase polyprotein; RNaseH; dUTPase; integrase; protease; reverse transcriptase protein_id : XP_001480879.1

name	4933421E11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87162472 GeneID:321000 MGI:2445214
definition	codon_start : 1 note : isoform 3 is encoded by transcript variant 3; receptor-interacting factor 1 product : receptor-interacting factor 1 isoform 3 protein_id : NP_001034567.1

name	4933421E11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87162474 CCDS:CCDS17726.1 GeneID:321000 MGI:2445214
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1; receptor-interacting factor 1 product : receptor-interacting factor 1 isoform 1 protein_id : NP_001034577.1

name	4933421E11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87162480 CCDS:CCDS17727.1 GeneID:321000 MGI:2445214
definition	codon_start : 1 note : isoform 2 is encoded by transcript variant 2; receptor-interacting factor 1 product : receptor-interacting factor 1 isoform 2 protein_id : NP_082357.2

name	Cd53 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671712 CCDS:CCDS17728.1 GeneID:12508 MGI:88341
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA] codon_start : 1 product : CD53 antigen protein_id : NP_031677.1

name	Olfr266 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239316 CCDS:CCDS17729.1 GeneID:258482 MGI:3030100
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2N6GK-529983-529033; olfactory receptor MOR122-2 product : olfactory receptor 266 protein_id : NP_666700.1

name	Kcna3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680516 CCDS:CCDS17730.1 GeneID:16491 MGI:96660
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : potassium voltage gated channel, shaker related subfamily, member 3 product : potassium voltage-gated channel, shaker-related subfamily, member 3 protein_id : NP_032444.1

name	Kcna2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543024 CCDS:CCDS17733.1 GeneID:16490 MGI:96659
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA] GO_function : GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : potassium voltage gated channel, shaker related subfamily, member 2 product : potassium voltage-gated channel, shaker-related subfamily, member 2 protein_id : NP_032443.2

name	Kcna10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487279 GeneID:242151 MGI:3037820
definition	GO_component : GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0005249 - voltage-gated potassium channel activity [Evidence ISS] GO_process : GO:0006813 - potassium ion transport [Evidence ISS] codon_start : 1 note : cyclic GMP gated potassium channel product : potassium voltage-gated channel, shaker-related subfamily, member 10 protein_id : NP_001074609.1

name	Gm131 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20875195 GeneID:229697 MGI:2684977
definition	codon_start : 1 product : similar to prochymosin isoform 1 protein_id : XP_131138.1

name	A630076J17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251432 GeneID:319929 MGI:2442999
definition	codon_start : 1 product : hypothetical protein LOC319929 protein_id : XP_001480893.1

name	Prok1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117676357 GeneID:246691 MGI:2180370
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA] GO_process : GO:0000187 - activation of MAPK activity [Evidence IDA]; GO:0007623 - circadian rhythm [Evidence TAS]; GO:0008284 - positive regulation of cell proliferation [Evidence IDA]; GO:0045765 - regulation of angiogenesis [Evidence IDA] codon_start : 1 product : prokineticin 1 protein_id : NP_001037847.1

name	Hbxip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251436 GeneID:68576 MGI:1915826
definition	codon_start : 1 product : hepatitis B virus x interacting protein protein_id : XP_001480896.1

name	Hbxip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251434 GeneID:68576 MGI:1915826
definition	codon_start : 1 product : hepatitis B virus x interacting protein protein_id : XP_001480894.1

name	Slc16a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122665 CCDS:CCDS17736.1 GeneID:229699 MGI:2385183
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 16, member 4 protein_id : NP_666248.1

name	Rbm15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249066 GeneID:229700 MGI:2443205
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004182 - carboxypeptidase A activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 product : RNA binding motif protein 15 protein_id : NP_001039272.1

name	Kcnc4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122333 CCDS:CCDS17738.1 GeneID:99738 MGI:96670
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA] GO_function : GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : potassium voltage gated channel, Shaw-related subfamily, member 4 protein_id : NP_666034.1

name	Slc6a17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26986569 GeneID:229706 MGI:2442535
definition	GO_function : GO:0015293 - symporter activity [Evidence IEA] codon_start : 1 note : sodium-dependent orphan neurotramsmitter transporter NTT4 product : solute carrier family 6 (neurotransmitter transporter), member 17 protein_id : NP_758475.1

name	Ubl4b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385770 GeneID:67591 MGI:1914841
definition	GO_process : GO:0006464 - protein modification [Evidence IEA] codon_start : 1 product : ubiquitin-like 4B protein_id : NP_080537.1

name	Alx3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106250 CCDS:CCDS17739.1 GeneID:11694 MGI:1277097
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] [Evidence ISS] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 function : possible role in patterning of mesoderm during development product : aristaless 3 protein_id : NP_031467.1

name	6330569M22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956344 GeneID:229707 MGI:2443884
definition	codon_start : 1 product : hypothetical protein LOC229707 protein_id : NP_705791.1

name	Ahcyl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734986 GeneID:229709 MGI:2385184
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] codon_start : 1 note : IP3R binding protein released with inositol 1,4,5-trisphosphate; S-adenosylhomocysteine hydrolase, related sequence 3 product : S-adenosylhomocysteine hydrolase-like 1 protein_id : NP_663517.2

name	Csf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677416 CCDS:CCDS17740.1 GeneID:12977 MGI:1339753
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA] [Evidence ISS]; GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0040018 - positive regulation of body size [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence ISS]; GO:0042488 - positive regulation of odontogenesis (sensu Vertebrata) [Evidence IMP]; GO:0045672 - positive regulation of osteoclast differentiation [Evidence IDA]; GO:0030278 - regulation of ossification [Evidence IMP] codon_start : 1 exception : mismatches in translation note : colony-stimulating factor-1; osteopetrosis product : colony stimulating factor 1 protein_id : NP_031804.2

name	LOC670819 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251351 GeneID:670819
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins product : similar to RIKEN cDNA 1110059E24 pseudo : _no_value transcript_id : XR_034266.1

name	EG624696 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149251354 GeneID:624696 MGI:3648401
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 11 Proteins product : predicted gene, EG624696 pseudo : _no_value transcript_id : XR_034276.1

name	2010016I18Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149251428 GeneID:69206 MGI:1916456
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA 2010016I18 gene transcript_id : XR_035458.1

name	AI504432 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149251133 GeneID:229694 MGI:2139742
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI504432 transcript_id : XR_035122.1

name	LOC383901 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251355 GeneID:383901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 8 Proteins product : similar to stratifin pseudo : _no_value transcript_id : XR_034292.1

clone name	MSMg01-149H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304L22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-475I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265O16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-531M13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-392C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072P14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-313G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262K14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-543M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090B16
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-428M10.T7 (MSMg01no428_m10.b1)	MSMg01-428M10.TJ (MSMg01no428_m10.g1)
ACC	AG521663	AG521664
length	768	785
length of high quality (start - end)	100 (131 - 230)	228 (79 - 306)
definition	CHROMAT_FILE: MSMg01no428_m10.b1 PHD_FILE: MSMg01no428_m10.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:51:03 2005	CHROMAT_FILE: MSMg01no428_m10.g1 PHD_FILE: MSMg01no428_m10.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:51:03 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAAAACGGAGCCGCG GAATTCTACCTTTTCCACAGAGGGACACTGCCTTCAAAAGGTAAGATTTA TGACTTTTAACAGCTCTAAATCATCTAATAAGGCACATAGTATTTTGAGA GTCTCCACACATCCCTTTAGTAACTTTAAAATGTGATGTGTTTACAAATA TTTAGATCAGCACTTCCCTTACGCAACTGGACTAGAAATACTTTGATTTA ATTGGTGCTTTATTTTCTGATATCTCTTTGGGTCTAAGTTATTCATAAGC TTACTTTATTATGCCATTTTTTTTTTTTACTGTATATGGTGTTTTCTAAT GCTTGAAGTTTTTGAGGCGAGATGACATGAAATTGGGGAGATCTTCTATG TAGTTTTTTCTTCAATTACCTGAATATTCATTTTATAGTATTACATCACC TCCTTTTCTTCAGCGTATTTCAATAGTAATTCTCAATACTTGTCGCCTTT GTTTTGAATATTTTTTATAATTTATCCCTTTGTTGACAATGTTATTGACT TGTTACCCCCACTCTATTCCACCACATCTGGCTCATTTTTCTGCCATGTT TCCGCCTTTCATGAATTTATCTTTCATTGTTCTTTTTTTTCCCTTTAATA CCCTCTTCCCGCCTCCCCCTTTCTTTCTTTCCCCACCCATATTCCCTTTC GTGACTTTCCTTCTCTTTTTACATATTTCCCTCACTCCCCTTTTCCCTAT TTTTTTTCTTTTCCCTCC	CACGATGATAGCGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAAACTCAAGGCTGACACCTA AACACATTTGTTTTCATGAATCTGTTGAAATTTGTTTTGTGTATAAGTTA TCAGGGTAACTATGTGTATATAGTCAATTTTAGAGGTTACTTAAGGTGCT GAGAAGAAGTTGTATTTTTTGTGGTTAGGTAAAATATTCTGTAGGTTCAT TTGACTCATAACCTCTGTTAGTTTCATTATTTATGTGTATTTTTTTTTCC TCGAAGACCTGTCCTTTGTTGTTTTTTGGGTTTCGAGGTCTCTTGCTATT AACGCATAATATTGTATGTGCGACTTATACCTTACTACCATCTTTTTTAC AACTGCGCTTTCTTTTTGTCTTTGGTCCACTTACGCTTCGAACTCGATCG TATTTTTGATGGATTCCTTTTTTGATGACCAAGAACCGTTTTTTCCCTTC CTCTTCTTATCCTTTTTTGTATGTCTTCCTACTCTATTTCTTTTTGCCTT TCGTCCCCTTTCTCTCCTACTCCTTGTTACTTGTTTTTCCCCTCTCCCTA TCCCTCCCCCTTTTCTCTTCTTTTTTTTTTTCCCTCTATTTATTCTTTTG TCTCTCTCCTCCCTCTTTTTTCTCTCTTTTCTTTCTCCCTCTCTTTTCTT ATTTATTACCTTATCCCCCCGCTTCTTCCTTTTTTCTTTTTTTTAATCAC ACTTTTTTCTTTTTCTTCCCTTTCCCTTTTTTCTN
quality values	Open. Hide. 7 7 8 10 8 8 8 8 12 23 23 24 23 21 21 11 10 13 3 0 3 17 19 15 12 11 3 0 3 9 9 6 7 7 8 7 8 8 9 8 8 6 8 8 8 6 6 12 22 25 28 26 26 32 32 33 23 21 10 10 10 8 7 9 9 9 6 8 11 11 11 12 12 22 21 28 30 25 30 30 37 39 36 37 39 39 42 48 47 47 41 39 39 39 35 35 47 47 48 42 47 47 48 57 57 57 43 42 27 19 14 21 21 31 32 32 15 15 14 14 10 12 11 11 11 11 24 21 19 14 14 24 27 32 37 37 36 20 12 10 10 10 19 24 57 59 57 48 42 42 35 35 32 40 43 35 35 33 33 29 29 29 43 43 48 48 44 44 43 36 36 23 36 31 42 42 42 35 35 35 32 36 22 20 20 25 25 20 20 24 24 25 28 31 28 32 35 43 43 59 59 48 44 32 28 28 30 29 17 18 14 15 15 34 34 46 43 39 32 31 23 23 26 32 25 32 23 19 15 11 12 15 21 19 19 19 25 24 25 17 17 17 30 30 32 24 24 21 24 17 17 17 19 13 9 8 8 10 10 12 24 37 43 46 34 34 23 23 23 37 32 37 37 31 28 23 28 28 28 24 14 14 14 15 20 21 14 10 11 19 19 16 13 14 14 12 21 12 13 12 18 22 13 14 12 12 14 18 13 13 13 13 13 21 12 13 12 14 17 20 24 26 24 11 12 10 10 12 16 16 26 17 24 15 26 21 25 22 15 15 11 10 10 10 13 13 15 25 29 25 30 22 28 28 26 17 10 9 9 12 12 16 15 15 11 11 11 11 11 10 11 12 13 11 8 8 8 11 10 18 17 18 18 15 12 11 11 12 11 15 15 18 11 11 11 21 19 28 17 13 10 10 10 13 13 16 23 22 12 12 11 11 8 8 8 8 8 8 10 10 11 9 8 8 8 8 8 10 8 8 8 13 10 11 11 9 8 8 8 10 8 8 6 6 6 8 8 8 8 11 21 18 17 19 14 10 10 10 11 10 13 10 10 8 8 8 8 8 10 8 10 8 8 9 9 9 9 9 9 8 8 11 8 8 8 9 8 10 10 8 8 8 9 13 12 15 10 10 10 9 9 10 10 12 10 10 10 9 9 12 10 10 10 10 14 12 11 9 8 8 8 8 8 8 10 18 22 28 16 12 9 9 9 8 8 8 8 8 8 12 12 10 9 8 8 8 8 8 8 9 9 9 9 9 9 11 9 12 10 7 6 8 8 10 8 8 8 8 8 8 10 8 8 9 9 9 8 10 8 8 6 8 8 8 8 8 12 12 10 8 8 8 8 8 8 8 8 8 8 13 8 8 8 8 8 6 8 8 8 8 8 8 8 8 8 8 10 8 6 6 6 8 10 11 10 10 8 8 10 8 10 10 15 10 10 10 10 12 11 11 11 8 8 10 10 10 8 8 6 6 8 8 10 10 10 10 10 7 8 8 8 10 10 11 13 10 10 10 10 13 17 13 10 11 10 10 10 10 17 15 11 6 8 6 6 8 8 8 8 8 8 8 8 8 8 8 11 11 9 8 9 9 9 10 9 9 9 9 9 10 8 8 6 6 7 7 12 7 9 8 8 8 8 8 12 9 9 9 9 8 10 7 7 8 8 8 8 8 8 9 9 8 10 17 15 10 10 9 10 10 15 15 37 37 23 13 6 6 6 8 8 8 8 8 6 6 8 6	Open. Hide. 8 8 6 8 8 8 8 8 8 8 8 8 11 10 10 12 13 9 8 8 8 15 21 35 35 39 30 24 20 24 12 12 9 11 9 8 8 8 8 8 8 8 8 8 15 16 22 16 15 21 18 19 19 18 21 28 37 41 32 25 15 9 7 7 7 7 7 8 9 9 25 17 11 11 22 22 28 26 33 36 36 48 48 39 37 33 25 25 25 32 30 43 43 50 43 43 36 42 37 40 43 32 32 23 23 28 43 43 59 59 54 54 48 50 47 47 47 48 41 31 26 23 23 35 35 35 42 43 57 57 47 47 47 47 57 57 50 50 47 47 47 47 47 48 46 44 42 42 32 35 37 43 43 44 44 44 50 47 50 50 57 50 57 37 37 37 52 57 57 57 52 52 42 43 37 35 35 43 50 44 43 31 31 31 43 43 43 43 43 43 43 43 23 27 27 43 38 44 29 23 32 23 21 29 33 29 31 24 24 13 13 13 24 24 27 27 31 44 43 57 57 43 38 24 17 18 17 23 23 29 43 43 43 43 42 42 35 37 36 37 28 28 23 23 28 32 24 28 28 36 37 32 27 23 18 18 15 15 18 24 22 28 36 36 32 30 28 36 36 37 37 37 39 43 39 33 33 33 30 35 35 32 31 31 21 21 16 17 17 29 30 32 32 23 23 23 40 37 39 33 37 32 24 24 18 18 18 23 23 23 20 15 21 15 20 20 26 18 9 9 9 9 10 12 15 12 14 12 11 10 8 8 10 8 8 10 12 12 11 12 12 21 20 23 14 14 23 28 19 9 8 8 8 8 8 9 16 23 31 21 23 18 19 11 13 13 13 15 15 12 12 12 12 12 14 12 15 12 11 11 13 13 19 8 8 8 8 8 8 8 8 8 8 8 11 10 10 8 10 8 9 9 9 10 10 10 10 8 8 8 8 8 10 15 18 18 15 10 10 10 10 12 16 10 10 10 10 10 9 8 8 8 8 10 10 8 8 8 8 8 8 10 8 8 6 6 8 8 8 8 8 8 8 8 8 8 9 12 16 16 10 10 10 10 9 9 10 14 15 29 25 19 18 15 16 12 10 10 10 10 9 9 9 9 9 12 9 10 10 10 19 10 8 8 10 8 9 11 12 10 13 17 10 10 13 10 10 9 9 9 10 10 18 21 21 17 15 8 8 8 6 6 8 8 18 13 12 8 8 8 8 8 8 8 6 6 8 10 13 11 11 10 15 23 13 15 10 10 10 10 8 8 8 8 13 13 28 22 22 21 21 10 8 8 8 8 10 10 10 10 10 10 10 14 11 11 12 9 9 9 10 10 10 11 17 17 13 10 10 10 10 10 10 10 9 8 8 10 11 9 9 10 10 14 16 13 13 13 10 8 8 10 15 8 9 9 9 11 11 22 22 28 14 14 12 16 18 17 19 16 10 10 12 8 8 8 9 9 10 11 9 9 9 14 22 30 19 15 6 6 8 8 8 8 8 7 7 10 8 10 12 12 12 12 9 9 13 19 17 9 8 8 12 9 9 10 11 11 17 10 8 8 6 6 6 6 8 8 10 10 9 9 10 10 14 15 10 10 10 13 13 10 17 12 12 10 8 8 8 8 8 8 8 8 11 8 14 11 9 8 8 8 12 10 19 18 12 11 11 10 13 9 12 13 19 13 17 17 17 17 13 20 11 8 8 8 6 8 8 9 9 9 11 17 12 16 12 12 15 22 24 8 8 6 6 8 8 8 8 7 7 6 6 8 9 14 19 25 28 21 17 10 13 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no428_m10.b1 MSMg01no428_m10.b1 CHROMAT_FILE:
MSMg01no428_m10.b1 PHD_FILE: MSMg01no428_m10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:03 2005
         (100 letters)



>mm_chr3_106592545_106593044
          Length = 500

 Score =  178 bits (92), Expect = 8e-50
 Identities = 98/100 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   aggcacatagtattttgagagtctccacacatccctttagtaactttaaaatgtgatgtg 60
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aggcacatagcattttgagagtctccacacatccctttagtaactttaaaatgtgatgtg 241

                                                   
Query: 61  tttacaaatatttagatcagcacttcccttacgcaactgg 100
           ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 240 tttacaaatatttagatcagcacttcccttaggcaactgg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 100
Length of database: 500
Length adjustment: 8
Effective length of query: 92
Effective length of database: 492
Effective search space:    45264
Effective search space used:    45264
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information