XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGTC
AGCAAAGTTCTGCCACCATACGGCAATGGCGGAAACACACCTGAATCAGC
TGCGGACTGGCATTTCATCTAAGGGAAATCCACACCTGACAACGACACAC
ATCTCATGCGGGAGGCATGGCCCTTTCCTTGGAGGAACCTCCTTGTTTAG
AGGTGTACCATACGGACCAAGGAGGAGGATAAAGGAAAGACAAACGACGG
AAACACCAGCTGTGACTGAACGTGTATGTGAACCCAGAGTTCAAATGTGA
TGCATGGCGACCCAAATTAGAGACAGTCACACAGGACACACGCACAGTTG
ATGTAAGCCAAGTTATTTCCATGCAAAGCAAAGGTGGGGGGAAAAAACTG
CTGGGCAGGGGCAGCCTTGCAGAGAAGCGCGGGCAGGAGGGTGGTAAGAA
ATTAGAACAAAAATGTAAAACGTTACTGTGGTGAAGCATGTTTACCTATG
AGGTCTGAAATGTACACTGAAGTCACAAGTCAGGGGGCCTTTTAACCACC
AATGGAGCGGAAGAAACCCCTCAGGGTTGGCTTATACAAAGACTTATGTT
AGGAAAATATGGACATTATATAAGGACTGCCTTTAAACTAAAAACACAGG
CCAATAGGAATCTACATTTTGAAACTGGAAGATATTCCAAGTATCCAGGT
GTCATTCAAGAGTATCCCTGGCATTATAGCAATATGGGCAATATTACN

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTACTTTGGGGTGTGGAACAGAATTT
CCAATGATATTAAAAAATGATATTAAACACATTTCTGCTATTTTCTGATA
TTTATCATGTAAAATGGCATTGTTGAAATTGGAGAGTATAAAATCCAAGT
ACCAGCCAGGTGACAGTGGTGGCGCATGCCTTTGATGCCAGCTCTCTGAA
GGCAGAGGCAGGTGGATCTCTTGAGTTTGAGGGCACCCTAGTCTACAAAG
TGAAGTCCAGGACACTTAATGTCTAGACAGAGAAACCCTGTCTCAAACAA
AGCAGCCAACCAACCAACAAACAAGTGAAAATGCCCATCAGCTCTTCAGA
TCTCTGTCATCACTGTCAACAAATATTTGGCCAAGATTTAAGTTTTGAGG
AAAAATAAACAAGCCTATCCATTTCAGTAGTACATAAAGTTTACTTCCAT
CTTTAGTAAATATAAAGTACAAAACTGCCTTAAAATAAATTTCCTTATGT
TGTATTATCAGGAAATTATATATATACATATATATATATATGTATATATC
TCAAGTATTTCCTGATAACCTATGTAACATATATATATAACATTATATAT
ATATATTATATATGGCTATACATAAACCAGCATTTCCTGATAATACATAT
CCCGAACATGTTTTATACT

Query= MSMg01no429_b03.b1 MSMg01no429_b03.b1 CHROMAT_FILE:
MSMg01no429_b03.b1 PHD_FILE: MSMg01no429_b03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:26 2005
         (619 letters)



>mm_chr3_126651054_126652071
          Length = 1018

 Score = 1166 bits (603), Expect = 0.0
 Identities = 609/611 (99%), Gaps = 1/611 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagtcagcaaagttctgccaccatacggcaatggcggaaacacacctgaatcagc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtcagcaaagttctgccaccatacggcaatggcggaaacacacctgaatcagc 264

                                                                       
Query: 65  tgcggactggcatttcatctaagggaaatccacacctgacaacgacacacatctcatgcg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgcggactggcatttcatctaagggaaatccacacctgacaacgacacacatctcatgcg 324

                                                                       
Query: 125 ggaggcatggccctttccttggaggaacctccttgtttagaggtgtaccatacggaccaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggaggcatggccctttccttggaggaacctccttgtttagaggtgtaccatacggaccaa 384

                                                                       
Query: 185 ggaggaggataaaggaaagacaaacgacggaaacaccagctgtgactgaacgtgtatgtg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggaggaggataaaggaaagacaaacgacggaaacaccagctgtgactgaacgtgtatgtg 444

                                                                       
Query: 245 aacccagagttcaaatgtgatgcatggcgacccaaattagagacagtcacacaggacaca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aacccagagttcaaatgtgatgcatggcgacccaaattagagacagtcacacaggacaca 504

                                                                       
Query: 305 cgcacagttgatgtaagccaagttatttccatgcaaagcaaaggtggggggaaaaaactg 364
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 505 cgcacagttgatgtaagccaagttatttccatgcaaagcaaaggtgggggaaaaaaactg 564

                                                                       
Query: 365 ctgggcaggggcagccttgcagagaagcgcgggcaggagggtggtaagaaattagaacaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctgggcaggggcagccttgcagagaagcgcgggcaggagggtggtaagaaattagaacaa 624

                                                                       
Query: 425 aaatgtaaaacgttactgtggtgaagcatgtttacctatgaggtctgaaatgtacactga 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaatgtaaaacgttactgtggtgaagcatgtttacctatgaggtctgaaatgtacactga 684

                                                                       
Query: 485 agtcacaagtcagggggccttttaaccaccaatggagcggaagaaacccctcagggttgg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agtcacaagtcagggggccttttaaccaccaatggagcggaagaaacccctcagggttgg 744

                                                                       
Query: 545 cttatacaaagacttatgttaggaaaatatggacattatataaggactgcctttaaacta 604
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cttatacaaa-acttatgttaggaaaatatggacattatataaggactgcctttaaacta 803

                      
Query: 605 aaaacacaggc 615
           |||||||||||
Sbjct: 804 aaaacacaggc 814


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1018
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1008
Effective search space:   613872
Effective search space used:   613872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)