XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCCGCGGAATTCTCATCTT
TTGCATACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTA
ATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACC
AGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGTG
GATGTAGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTT
GTACAACCACTCTGGAAATCAGTCTGGTGGTTCCTCAGAAAATTGGACAT
AGTACTACCGAAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAG
ATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCC
TCATTTATAATAGCCAGAAGTTGGAAAGAACCCAGATGCCCCTCAACAGA
GGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTACTACTCAG
CTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATGGACCTG
GAGGGCATCTTCCTGAGTGAGGTAACACATTCACAAAGGAACTCACACAA
TATGTACTCACTGATAAGTGGATATTAGCCCAAAACCTANGATACCCAAG
ATATAAGATACAATTTTCTAAACACATGAAACTCAAGAAAAATGAAGACT
GAAGTGTGGACACTATGCCTCTCCTTAGAAGTGGGAACAAAAACCCCTTG
GAA

ATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAA
GCACCTCCTTATTTTCTTAGACATGTCATTGTTTTGAGACTCTCCAACTC
AAAACACCATCTATTTCCTAGCTTTTATGCTGCCTATGGCCAATTTTTTA
TAATTATAAATATATAGATTCATTAAATATAAATATAATTATTTCTATTG
GCTTTTATGACATATTACACATGAATAAATATCAATTCAAAAATAGATAA
TTGAGATTACATATTCCTGGGTGTCTTTAGCTCATATCAAGATGACAAAA
CCTAACCAACTCATATATTTAGTTTCCATTCACTTCAAAATGTTTTGCTA
GTGACTTTGAATTGGTTTCCATTTAGAAAAGAAATATTCATCCCTAAATC
TAATTTCATATGGGTTATAGACATACTTTTAGAATTTAAAACAAACATAA
CATTATTTTAAACCCTGTTAAGCCTCAGATTCCAGTACGAACATTAATAT
TTTGAGACATTAATGTATACCATTAATAATTGAAAATTATATTAGCCACA
TTATGTCTGATTTAAAATGCCTTAATCGCATTTTTAACACCAATTGCCAT
GAACATCATGCCGTCTAACATTTCCGCTTGGTTTGATGTAAACACACTTT
TTTTCCCTAAAACCTCTCTTTTG

Query= MSMg01no429_h04.g1 MSMg01no429_h04.g1 CHROMAT_FILE:
MSMg01no429_h04.g1 PHD_FILE: MSMg01no429_h04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:56 2005
         (414 letters)



>mm_chr3_11907807_11908620
          Length = 814

 Score =  731 bits (378), Expect = 0.0
 Identities = 405/414 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcacctgaggaataccgaatggcagagaagcacctccttattttcttagacatgtcattg 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 787 tcacctgaggaataccaaatggcagagaagcacctccttattttcttagacgtgtcattg 728

                                                                       
Query: 61  ttttgagactctccaactcaaaacaccatctatttcctagcttttatgctgcctatggcc 120
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ttctgagactctccaactcaaaacaccatctatttcctagcttttatgctgcctatggcc 668

                                                                       
Query: 121 aattttttataattataaatatatagattcattaaatataaatataattatttctattgg 180
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 667 atttttttataattataaatatatagattcattaaatataaatataattatttctattga 608

                                                                       
Query: 181 cttttatgacatattacacatgaataaatatcaattcaaaaatagataattgagattaca 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 607 cttttatgacatattacacatgaataaatatcaattcaaaaatagataattgagatgaca 548

                                                                       
Query: 241 tattcctgggtgtctttagctcatatcaagatgacaaaacctaaccaactcatatattta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tattcctgggtgtctttagctcatatcaagatgacaaaacctaaccaactcatatattta 488

                                                                       
Query: 301 gtttccattcacttcaaaatgttttgctagtgactttgaattggtttccatttagaaaag 360
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 487 gtttccattcacttcaaaatgttttgctagtgattttgaattggtttccatttagaaaag 428

                                                                 
Query: 361 aaatattcatccctaaatctaatttcatatgggttatagacatacttttagaat 414
           || |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 427 aagtattcatccctaaaactaatttcatatgggttatagacatacttttagaat 374


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space:   326025
Effective search space used:   326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)