MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-430B07
Chromosome	3 (Build37)
Map Location	18,936,839 - 18,937,300
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Bhlhb5, Cyp7b1, LOC622921, LOC100040153
Downstream gene	Armc1, Mtfr1, Pde7a, Dnajc5b, EG620290, Trim55, Crh, LOC665002, LOC100039304, LOC100040237, 4632415L05Rik, Cp, Hps3
Link	Open Mouse BAC browser

Click to get alignment info.

name	Bhlhb5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59058 MGI:1930001
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyp7b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13123 MGI:104978
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC622921 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100040153 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040153
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Armc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74252 MGI:1921502
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtfr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67472 MGI:1914722
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pde7a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18583 MGI:1202402
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnajc5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66326 MGI:1913576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG620290 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620290 MGI:3646012
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins

name	Trim55 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381485 MGI:3036269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12918 MGI:88496
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665002 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665002
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100039304 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039304
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100040237 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	4632415L05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70808 MGI:1918058
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Cp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12870 MGI:88476
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Hps3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12807 MGI:2153839
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bhlhb5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803428 GeneID:59058 MGI:1930001
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : basic helix-loop-helix domain containing, class B5 transcript_id : NM_021560.3

name	Cyp7b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353883 GeneID:13123 MGI:104978
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 7, subfamily b, polypeptide 1 transcript_id : NM_007825.3

name	Armc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542136 GeneID:74252 MGI:1921502
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : armadillo repeat containing 1 transcript_id : NM_028840.2

name	Mtfr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363119 GeneID:67472 MGI:1914722
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial fission regulator 1 transcript_id : NM_026182.4

name	Pde7a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679246 GeneID:18583 MGI:1202402
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 7A transcript_id : NM_008802.1

name	Dnajc5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42475999 GeneID:66326 MGI:1913576
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily C, member 5 beta transcript_id : NM_025489.2

name	EG620290 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369437 GeneID:620290 MGI:3646012
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : predicted gene, EG620290 transcript_id : XM_884597.2

name	Trim55 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486876 GeneID:381485 MGI:3036269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tripartite motif-containing 55 transcript_id : NM_001081281.1

name	Crh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45429989 GeneID:12918 MGI:88496
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : corticotropin releasing hormone transcript_id : NM_205769.1

name	Cp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110815852 GeneID:12870 MGI:88476
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ceruloplasmin transcript_id : NM_001042611.1

name	Cp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347563 GeneID:12870 MGI:88476
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ceruloplasmin transcript_id : NM_007752.2

name	Hps3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385576 GeneID:12807 MGI:2153839
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Hermansky-Pudlak syndrome 3 homolog (human) transcript_id : NM_080634.3

name	Bhlhb5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981200 CCDS:CCDS17253.1 GeneID:59058 MGI:1930001
definition	GO_function : GO:0016564 - transcriptional repressor activity [Evidence IDA] codon_start : 1 exception : mismatches in translation note : basic helix-loop-helix (bHLH) gene, class B, beta3 product : basic helix-loop-helix domain containing, class B5 protein_id : NP_067535.2

name	Cyp7b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677410 CCDS:CCDS17254.1 GeneID:13123 MGI:104978
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence TAS] [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008396 - oxysterol 7-alpha-hydroxylase activity [Evidence IDA] GO_process : GO:0006699 - bile acid biosynthesis [Evidence IDA]; GO:0008203 - cholesterol metabolism [Evidence IEA]; GO:0007586 - digestion [Evidence TAS]; GO:0006118 - electron transport [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : cytochrome P450, 7b1 product : cytochrome P450, family 7, subfamily b, polypeptide 1 protein_id : NP_031851.2

name	Armc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312676 CCDS:CCDS17255.1 GeneID:74252 MGI:1921502
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : armadillo repeat containing protein product : armadillo repeat-containing protein protein_id : NP_083116.1

name	Mtfr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22267450 CCDS:CCDS17256.1 GeneID:67472 MGI:1914722
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] codon_start : 1 product : mitochondrial fission regulator 1 protein_id : NP_080458.1

name	Pde7a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679247 GeneID:18583 MGI:1202402
definition	GO_function : GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : phosphodiesterase 7A protein_id : NP_032828.1

name	Dnajc5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42476000 CCDS:CCDS17257.1 GeneID:66326 MGI:1913576
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : DnaJ (Hsp40) homolog, subfamily C, member 5 beta protein_id : NP_079765.2

name	EG620290 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82800464 GeneID:620290 MGI:3646012
definition	codon_start : 1 product : similar to bcl-10 protein_id : XP_889690.1

name	Trim55 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486877 GeneID:381485 MGI:3036269
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0042802 - identical protein binding [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : ring finger protein 29 product : tripartite motif-containing 55 protein_id : NP_001074750.1

name	Crh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45429990 CCDS:CCDS17258.1 GeneID:12918 MGI:88496
definition	GO_process : GO:0006954 - inflammatory response [Evidence IMP] codon_start : 1 note : corticoliberin; corticotropin releasing factor product : corticotropin releasing hormone protein_id : NP_991338.1

name	Cp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110815853 GeneID:12870 MGI:88476
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005507 - copper ion binding [Evidence IDA] [Evidence IEA]; GO:0005375 - copper ion transporter activity [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA] [Evidence IDA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006825 - copper ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006826 - iron ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : ceruloplasmin isoform a protein_id : NP_001036076.1

name	Cp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347564 GeneID:12870 MGI:88476
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005507 - copper ion binding [Evidence IDA] [Evidence IEA]; GO:0005375 - copper ion transporter activity [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA] [Evidence IDA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006825 - copper ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006826 - iron ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : ceruloplasmin isoform b protein_id : NP_031778.2

name	Hps3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560001 CCDS:CCDS17260.1 GeneID:12807 MGI:2153839
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_process : GO:0006996 - organelle organization and biogenesis [Evidence IMP] codon_start : 1 exception : mismatches in translation note : cocoa product : Hermansky-Pudlak syndrome 3 homolog protein_id : NP_542365.2

name	LOC622921 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622921
definition	number : 1 pseudo : _no_value

name	LOC100040153 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040153
definition	number : 1 pseudo : _no_value

name	LOC100040153 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040153
definition	number : 2 pseudo : _no_value

name	LOC100040153 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040153
definition	number : 3 pseudo : _no_value

name	LOC100040153 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040153
definition	number : 4 pseudo : _no_value

name	LOC665002 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665002
definition	number : 1 pseudo : _no_value

name	LOC100039304 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039304
definition	number : 1 pseudo : _no_value

name	LOC100040237 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040237
definition	number : 1 pseudo : _no_value

name	LOC100040237 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040237
definition	number : 2 pseudo : _no_value

name	LOC100040237 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040237
definition	number : 3 pseudo : _no_value

name	4632415L05Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149250841 GeneID:70808 MGI:1918058
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : RIKEN cDNA 4632415L05 gene transcript_id : XR_035234.1

clone name	MSMg01-343N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506K15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-337P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543P12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-477A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484E15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-484C19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-108K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268O22
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-430B07.T7 (MSMg01no430_b07.b1)	MSMg01-430B07.TJ (MSMg01no430_b07.g1)
ACC	AG522658	AG522659
length	772	1,214
length of high quality (start - end)	486 (51 - 536)	---
definition	CHROMAT_FILE: MSMg01no430_b07.b1 PHD_FILE: MSMg01no430_b07.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:52:45 2005	CHROMAT_FILE: MSMg01no430_b07.g1 PHD_FILE: MSMg01no430_b07.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:52:45 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NNCCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CGCGGAATTCTTAAGTACAGAAATAACAAAATGGAAAATAAAAAAGAGCA TTAATCTTCCTAACGAAAACTGCAGGAAGGGTCCAAGGAGATGCATCAGT GGGCAAAGGCAGTTGCTGCCAAGCCTGGCTACCTGAGTTCAATTCCTAGA ACCCACATGGTGAAACAAAGACCCCATTCCCACAAGTTGTCCTCTGACCC CACGTACACATGAAAAAATAAAATAAATAAATAATTTTTAAGCTACAGTG TTGTCAAATAATTTGATTAAGTGAGGAAGAACAGAAAGGCAAGCAAAAAG AAGATATCTCACAGGTAGATATTTTCATATATTGACTATTATGACCATAT TCTGATTTGAATTACTTAGGGTAAGAACCCAGAAATAATAATGATAGATC ATACTTAAATTTCATTGCTTACTTTGGTATATATAGAGAGTACATATGTA CAGTATATACATACAGTATGTACATACAGTATATGCATACAGGATATAGC AAATCCAAATGGAGCGTGGAAACCTACCACATCATGGGTAAGCATAGACG ATATCCTACTTTTGGAATAATTCCCTTCAAGACAAAAAACACTGTGATTC TTGTTTTTACAGGGGCTATCTATAGTGGGCCAAAAAATGGCCTGGCGAAA TCTCTCCTTGGTTTCCAACCCCCGCTTTTTTCTTCCCCAGCAAATACAAT TTGGTCCTCTCTTTTCCTTGTN	AAAAAACATGTGGAGAGAGGGAGAAAAAGAGTGGGGGGTGTGGGCGGGGT TGCCTCATCGATAGTGGCTCTGATGTGTGAGGGGATGTAGCAGGCGGGGG CACGCCGGCGCGGCCGGGCACCTTGTCCCGTGGCCGCGTCGCCGTTTCCG CCGCTGGGCATAAGATGCGTGTGAATTCAATATACTGTGGGCTGTCCACG TCTACCGCCGTGTTCTGCATCCCGCAAATACACCCCTCGAGTCTTATCAT TTAAGCCTTACCACACGCGACTGACCAATTAGGCTCTAATCTCCCCTTCG CTCTTCGCGTTTCTCGCGGTCTCGGATCCTCCTCTTTTATCAATGCGCTT TCCGCCATCGGCCGTACGCTGGTTGAGTATAGTGGGGCCATGTGGTGATC GATTAGCTTCTAGCCCTGTGCGCCTGAGTGCGCCCCGCGTTATACCTTCG TGGGCCGGTCGGCCATAACGGCGGGGCGGCCGGAAATGGCGGCGAGCATA GGAGCGAAGTTCGCCTGTTTCGCGGTGGTGGCATCCGAGCGGGAGCGTAT GAGGGTGGGCGTGTTTTGTAATACGCCGCACAGATTACCGGTAGTGCCTA GAGCTTGTGGGGGGCGTCAGTTTAGGCGCGCGTCAGTATGGGAATTACCG CGAGGCTGCGAATCGCGACCTAAGTATTATGCGACGAATATGCGTGGAGA TCCTTCTTAGATGTTGTTTCGCTCCTTTATAAGCGCCCGCTTGTACGCGT ATATGAATATGGCTCGTCGATGACCCAATTCATAGATGGGTGTTAATGAG TAGGGCGCAGCTGAGGACACAGCGGTGAGGGTATTGTACGACGCGATACG CGTGGTATATGGGATGGTGGCGCGTGTGTAGAGCGGTGATTACATTGAAA GCGCACGCACGCCTAATACATCACTGAGGTAAGTACGCTTTCGCCACATA TTAGCCTTCGCGTATGATATGTCACGCTTGTAAGTAGGAGAGAGGATGAA TGAGACAAGCCGGGCGTGTCTATTCCTTGTAACCCGATCTCACTCTGGTT GCACCTATTTTGGTGGTGCTCGGGAGTAATTCCCTCGGTGATAGTGAACG CCTTGAGCGTGTACATATGTACCGCGGCTGGCGTACATGTGTGGAGGATG TGCGTGTAGAACGGCGGTTCCGTCATTGATCGCACTGTATACACAGGAGT GCATGGTANCGANT
quality values	Open. Hide. 0 0 3 6 6 6 10 10 10 10 10 21 23 23 26 20 11 11 21 21 28 27 24 24 28 28 35 30 50 48 26 24 21 17 17 17 23 11 11 11 12 12 26 26 37 22 22 12 14 14 25 30 59 59 36 37 37 37 50 50 59 59 59 47 47 29 31 25 28 28 28 42 42 48 51 48 43 47 47 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 57 57 57 57 57 50 50 68 48 48 48 50 50 50 57 57 57 57 57 57 59 59 59 59 59 59 68 68 68 68 68 68 68 68 57 59 57 52 52 57 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 57 57 68 57 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 68 68 62 62 62 62 62 62 62 68 68 68 68 68 62 62 62 62 62 62 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 68 68 68 62 62 62 62 62 62 52 52 52 62 62 62 62 62 68 68 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 59 59 59 59 57 57 59 59 59 68 68 68 68 68 68 59 59 54 54 50 59 57 57 57 57 57 57 50 46 46 43 43 59 59 59 59 59 59 59 57 57 57 47 43 43 57 57 57 57 54 54 57 59 59 59 59 59 59 59 59 46 46 43 43 43 46 43 48 48 48 48 54 54 47 34 41 30 30 28 40 40 48 48 57 48 48 48 40 40 30 28 28 23 23 23 34 34 39 33 33 19 21 14 23 23 34 34 26 24 14 14 14 26 23 30 30 31 32 24 20 22 20 24 28 28 31 22 22 20 26 28 30 27 29 26 16 16 15 24 18 20 24 24 18 23 18 28 18 23 19 16 14 14 15 14 14 14 12 14 18 24 24 35 23 23 9 9 9 20 20 34 33 31 31 35 22 21 8 8 8 9 11 9 13 13 18 16 13 12 11 12 14 10 8 8 7 7 7 8 10 10 8 8 8 7 9 12 13 10 10 12 16 14 18 10 11 11 14 15 10 10 9 9 9 10 9 8 8 8 10 10 9 9 9 11 17 20 12 12 10 10 10 10 10 10 10 10 10 10 10 10 10 12 8 10 8 8 8 8 8 10 12 12 10 10 8 8 9 8 8 8 6 6 8 8 9 8 10 9 10 10 14 13 12 9 8 8 6 6 10 6 8 8 8 8 8 10 10 13 6 6 6 6 8 8 10 10 10 13 16 13 10 10 10 10 10 10 10 13 12 10 8 8 6 6 6 7 17 11 12 14 10 11 12 8 8 8 10 8 10 10 10 9 9 8 8 8 8 8 8 11 8 8 8 10 8 8 8 10 10 11 11 10 8 10 8 8 8 10 10 3 0	Open. Hide. 10 10 10 11 10 8 8 8 8 6 8 9 11 10 10 10 9 8 8 9 9 12 10 12 10 9 10 9 9 9 11 12 12 15 16 18 18 11 11 11 10 9 8 8 8 8 8 8 8 8 8 8 11 12 9 8 8 8 8 8 8 8 8 9 9 11 12 12 11 10 10 18 11 11 8 8 8 8 8 8 11 11 11 12 10 9 9 9 8 8 6 6 6 6 6 6 8 6 6 6 6 6 6 9 10 10 10 8 8 13 8 8 8 9 10 9 10 10 8 8 8 9 9 9 9 9 8 8 8 6 6 8 8 8 10 8 8 8 11 11 8 8 7 7 8 8 10 8 8 8 10 12 12 12 8 8 8 8 8 8 7 6 8 8 10 11 10 10 10 8 8 7 9 8 6 6 6 6 10 10 8 8 8 12 12 11 10 10 10 10 10 9 9 9 9 9 8 8 8 6 6 6 8 8 8 8 10 8 8 8 8 8 8 8 9 9 8 8 8 8 8 8 10 9 9 9 9 9 9 8 9 8 8 8 10 8 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 9 8 8 8 8 8 8 7 6 10 8 8 6 6 6 6 8 8 12 12 10 10 8 8 8 8 8 8 8 8 10 11 9 9 9 9 9 9 9 10 12 10 10 9 9 9 8 8 8 10 8 8 8 8 8 8 10 10 8 8 8 8 8 8 8 6 6 6 6 8 8 8 8 8 10 10 10 11 12 12 12 9 9 9 10 13 10 9 8 8 8 8 8 8 9 11 11 11 9 12 10 9 8 8 8 8 8 8 8 8 8 8 8 9 9 9 11 11 11 9 8 8 8 8 8 8 8 8 8 8 8 11 8 8 8 8 6 6 9 9 8 8 8 8 8 6 6 6 6 9 10 10 9 8 8 8 8 8 8 8 8 6 6 8 8 10 8 8 8 8 8 11 11 11 11 11 12 12 12 11 11 8 8 6 6 8 8 8 8 8 8 10 10 10 10 8 8 8 8 14 12 8 8 8 8 8 8 10 11 11 11 11 11 10 8 8 8 8 8 8 8 8 10 13 11 13 12 15 10 10 8 8 7 7 9 7 9 9 10 10 6 6 8 8 10 8 8 8 11 9 8 8 7 7 8 8 10 10 10 10 10 10 10 11 10 10 10 8 8 6 6 10 8 14 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 10 10 8 9 6 7 6 6 8 8 8 10 10 8 8 8 8 8 8 10 8 8 8 8 10 10 8 8 8 8 8 9 8 8 10 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 10 11 10 8 8 8 8 8 6 7 8 8 12 8 8 6 6 8 6 8 8 10 10 10 12 15 12 11 8 8 6 6 8 8 10 6 7 8 8 8 8 9 9 8 10 8 8 6 6 8 10 6 6 10 8 10 8 9 10 8 8 8 12 10 10 10 8 11 8 8 8 8 8 8 8 8 9 8 8 8 6 6 8 8 8 8 8 8 11 9 9 9 9 9 10 12 14 11 11 9 9 9 10 10 8 8 8 6 6 6 6 8 8 8 6 6 6 6 6 6 8 8 8 8 11 8 10 10 13 13 10 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 12 10 10 10 11 11 13 22 8 8 6 6 6 6 8 6 6 8 6 6 8 8 8 8 8 8 11 9 9 9 8 8 6 6 6 6 8 8 8 8 8 10 8 8 9 8 8 8 10 8 8 8 8 9 9 8 10 8 8 8 8 11 10 11 12 12 12 10 9 9 9 13 13 12 11 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 7 7 9 8 8 8 7 6 8 8 8 8 8 8 8 8 9 7 8 8 8 8 8 8 8 8 6 6 8 8 12 11 11 8 8 8 8 8 12 8 8 8 6 7 10 7 8 8 8 10 10 6 6 6 8 9 9 8 8 8 6 6 6 8 8 7 6 8 6 6 6 6 6 6 8 6 6 6 6 6 6 8 8 8 6 6 6 6 8 6 8 9 8 8 6 6 8 8 8 10 8 8 8 8 11 15 16 11 11 11 8 8 8 8 8 8 8 8 8 8 8 8 9 9 9 9 10 10 10 8 10 8 8 8 10 8 8 8 8 6 8 6 6 6 8 10 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 10 8 8 6 6 6 6 9 11 11 13 10 11 8 8 6 6 6 10 6 6 6 6 6 6 6 8 8 8 8 9 9 9 10 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 10 9 9 6 8 6 6 8 10 10 10 8 8 8 8 8 6 8 6 6 8 10 8 8 9 9 9 10 11 11 11 12 11 11 11 10 10 9 6 6 6 8 8 8 8 8 8 8 8 8 16 13 16 15 15 8 8 6 6 6 6 6 6 7 7 10 8 9 8 8 6 6 6 6 8 8 8 8 8 9 9 9 10 11 6 6 6 6 6 8 8 8 8 10 8 10 10 8 8 8 8 8 8 8 8 6 7 6 6 8 9 9 10 9 8 8 10 8 9 8 8 8 6 6 8 6 6 6 8 6 6 8 6 9 10 15 13 14 12 8 8 8 3 0 3 8 3 0 3

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no430_b07.b1 MSMg01no430_b07.b1 CHROMAT_FILE:
MSMg01no430_b07.b1 PHD_FILE: MSMg01no430_b07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:45 2005
         (486 letters)



>mm_chr3_18936635_18937520
          Length = 886

 Score =  801 bits (414), Expect = 0.0
 Identities = 450/462 (97%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttaagtacagaaataacaaaatggaaaataaaaaagagcattaatcttcctaac 64
           ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 205 gaattctcaagtacagaaataacaaaatggaaaataaaaaagagcattaatcctcctaac 264

                                                                       
Query: 65  gaaaactgcaggaagggtccaaggagatgcatcagtgggcaaaggcagttgctgccaagc 124
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 265 gaaaactgcaggaagggtccaaggagatgcatcagtgggtaaaggcagttgctgccaagc 324

                                                                       
Query: 125 ctggctacctgagttcaattcctagaacccacatggtgaaacaaagaccccattcccaca 184
           ||||| ||||||||||||||||||||||||||||||||||| |||||  |||||||||||
Sbjct: 325 ctggccacctgagttcaattcctagaacccacatggtgaaaaaaagataccattcccaca 384

                                                                       
Query: 185 agttgtcctctgaccccacgtacacatgaaaaaataaaataaataaataatttttaagct 244
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agttgtcctctgaccccacatacacatgaaaaaataaaataaataaataatttttaagct 444

                                                                       
Query: 245 acagtgttgtcaaataatttgattaagtgaggaagaacagaaaggcaagcaaaaagaaga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 445 acagtgttgtcaaataatttgattaagtgaggaagaacagaaaggcaagcaaagagaaga 504

                                                                       
Query: 305 tatctcacaggtagatattttcatatattgactattatgaccatattctgatttgaatta 364
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tatctcacaggtagacattttcatatattgactattatgaccatattctgatttgaatta 564

                                                                       
Query: 365 cttagggtaagaacccagaaataataatgatagatcatacttaaatttcattgcttactt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 565 cttagggtaagaacccagaaataataatgatagatcatacttaaatttcattgcttaatt 624

                                                     
Query: 425 tggtatatatagagagtacatatgtacagtatatacatacag 466
           |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 625 tggtatatatagagagtacatatgtacagtatatgcatacag 666


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space:   416976
Effective search space used:   416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information