Query= MSMg01no430_n14.b1 MSMg01no430_n14.b1 CHROMAT_FILE:
MSMg01no430_n14.b1 PHD_FILE: MSMg01no430_n14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:54 2005
(254 letters)
>mm_chr3_107176603_107177255
Length = 653
Score = 468 bits (242), Expect = e-136
Identities = 251/254 (98%), Gaps = 1/254 (0%)
Strand = Plus / Minus
Query: 1 attgttatactatgccagggctgcaaacctcatgctttctctgggtgccagcttacaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 attgttatactatgccagggctgcaaacctcatgctttctctgggtgccagcttacaagg 394
Query: 61 cctttgtatcagagctaggagaaagagagagaacctttaaagagactctgaatattgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cctttgtatcagagctaggagaaagagagagaacctttaaagagactctgaatattgaag 334
Query: 121 atgggaaattggacccatagatgctaaactgttatcaaatttcaaattcaggtaggcaga 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 atggaaaattggacccatagatgctaaactgttatcaaatttcaaattcaggtaggcaga 274
Query: 181 agcagcatcaagagccattctggccactgccctgactcttcgctaatttatttggagaga 240
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 273 agcagcatcaagagccattc-agccactgccctgactcttcgctaatttatttggagaga 215
Query: 241 gctggaactatctg 254
||||||||||||||
Sbjct: 214 gctggaactatctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 653
Length adjustment: 9
Effective length of query: 245
Effective length of database: 644
Effective search space: 157780
Effective search space used: 157780
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no430_n14.g1 MSMg01no430_n14.g1 CHROMAT_FILE:
MSMg01no430_n14.g1 PHD_FILE: MSMg01no430_n14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:54 2005
(133 letters)
>mm_chr3_106976919_106977451
Length = 533
Score = 255 bits (132), Expect = 6e-73
Identities = 132/132 (100%)
Strand = Plus / Plus
Query: 1 atgtgtgcagcagatctgttatgtccaaacaacacagctttgcaggaatcctttgcaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgtgtgcagcagatctgttatgtccaaacaacacagctttgcaggaatcctttgcaacc 260
Query: 61 tctggctttataatctttcttgataacccttgatctttgggagaaatattaggggtagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctggctttataatctttcttgataacccttgatctttgggagaaatattaggggtagaa 320
Query: 121 ggggtgcctgtg 132
||||||||||||
Sbjct: 321 ggggtgcctgtg 332
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 133
Length of database: 533
Length adjustment: 8
Effective length of query: 125
Effective length of database: 525
Effective search space: 65625
Effective search space used: 65625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
