XXXXXXXXXXXXXXXXXXXXXXXTTTTGAGGATCCGCGGAATTCACAGCA
GAGGAATTTCGAATGGCTTAGAAACACCTAAAGAAATGTTCAAAGTCCTT
AGTGATCAAAGCAATGCAAATCAAAATGACCCTGAGATTCTACCTTACAC
CAATCAGAATGGCTAAGATTAAAACCTCAGGTGACAACACATGTTGGTGA
GGATGTGGAGAAAGAGGAGCACTCTTCCATTGCTGGTAGGACTGCGAACT
GGTACAACCACTCTGGAAATTAATCTGGATGTTCCTCAGAAAATTGGAAA
TGGATCTACCTGAATACCCAGCAATACCTCTCTTGGGAATGTACCCAAAA
GATGCCCTGCTATGCCACAGGTGCATGTGTTCCACTATGTACATAGCAGC
CTTGTTTGTGATAGCCAGAAGCTGGAAACAACCCAGATGTACCACAACAG
AATGGATACAGACAATGTGATTCATTTACACAATGGAATACTACTCAGCT
ATTAAGAATGAGAACATTCTGAGTTTTACAGGCAAATGGATTGGACTANA
AAATATCATCCTGAGTGAGGTAACTCAGACCCCAAAGACTGGCTGGGATA
TCTCCTTTATAAGGGAAATTAGTAAAAAAAAAAAAAAAATGGCCGATACC
CCAAATTTATTCCCCGAAATCAAAAGTTTCCCAGGTTGAAGGGGCCCGCC
CCCCTTGTGGGGGAAAAAAAAAAACCACTGGGGGGGAAGGGTCCTATAGG
AAAGGGATGTGGGGTGTGTNCTCTTCTCNTCCCTCACTTTCTCC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXCTATTCATGCAAATGAAGTATTTCTAGCACCTCTGTA
CTAACCAATAATGAACACTCACCTGGAAAACCTCCTACCCACTCCCCAAA
GTTTATATAGCCCCCATTACTCACAATAAAGAAGGCTGTAACAATGAAAA
CTTTCTTGGAGAAGACTCACCCACATCCACACTCAAAACAACCGAGTTCC
TGTGAACCCACCCATATGGTTAAGCTTCCTTCCTTCCATTCTGGTCCAGC
TCCCAGAGGTGGTAAATACAAGGGCAGAAGTAGAGCCTGGCCAGACTTCA
TAGAAGGCATTGACAAAGAGTTCTCATCGTAGACAGACCATGAACATCAG
CAAGTCACAAAAGAAAGATACTATTGAGTTATAGTTCCTGCTTTTTGGCT
GGAAAGTATGAAGTCTGGGGTTGTTTTGGGCCCAAGTGGGGAATTCTATC
AGTATAACTTAGCTAACTGTAAATCCAGAACATTTACTGATCTAAAATCC
TCTCATGAATTTTTTTTCTTATATACTGGATATTTTAGATGCAATTAGCT
CTATTCTTCATAACTAAATTAACGCTACAGAAACCGGAATATTTTGAAGA
ACCCCAGGGGTGGCTGGGGCATCCCCCTGGTTAACCCCCTAAGGGTTAAT
TGTTTCAAACCCAGGTTTTCAAATTACAAAACCCCTCTTATTTTTGTTGG
TTCCACCAAGGGGTATTGGCTCCGG

Query= MSMg01no431_b20.g1 MSMg01no431_b20.g1 CHROMAT_FILE:
MSMg01no431_b20.g1 PHD_FILE: MSMg01no431_b20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:17 2005
         (458 letters)



>mm_chr3_115083889_115084748
          Length = 860

 Score =  832 bits (430), Expect = 0.0
 Identities = 452/460 (98%), Gaps = 2/460 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctattcatgcaaatgaagtatttctagcacctctgtactaaccaataatgaacactcacc 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 778 ctattcatgcaaatgaagtatttccagcacctctgtactaaccaataatgaacactcacc 719

                                                                       
Query: 61  tggaaaacctcctacccactccccaaagtttatatagcccccattactcacaataaagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tggaaaacctcctacccactccccaaagtttatatagcccccattactcacaataaagaa 659

                                                                       
Query: 121 ggctgtaacaatgaaaactttcttggagaagactcacccacatccacactcaaaacaacc 180
           ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 658 ggctgtaacaatgaaaactttcttggagaagactcgcccacatccacactcaaaactacc 599

                                                                       
Query: 181 gagttcctgtgaacccaccc--atatggttaagcttccttccttccattctggtccagct 238
           ||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||
Sbjct: 598 gagttcctgtgaacccacccatatatggtcaagcttccttccttccattctggtccagct 539

                                                                       
Query: 239 cccagaggtggtaaatacaagggcagaagtagagcctggccagacttcatagaaggcatt 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 cccagaggtggtaaatacaagggcagaagtagagcctggccagacttcatagaaggcatt 479

                                                                       
Query: 299 gacaaagagttctcatcgtagacagaccatgaacatcagcaagtcacaaaagaaagatac 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gacaaagagttctcatcgtagacagaccatgaacatcagcaagtcacaaaagaaagatac 419

                                                                       
Query: 359 tattgagttatagttcctgctttttggctggaaagtatgaagtctggggttgttttgggc 418
           || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 418 tactgagttatagttcctgctttttggctggaaagtatgaagtctggagttgttttgggc 359

                                                   
Query: 419 ccaagtggggaattctatcagtataacttagctaactgta 458
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ccaagtggggaattctatcagtataacttagctaactgta 319


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 860
Length adjustment: 10
Effective length of query: 448
Effective length of database: 850
Effective search space:   380800
Effective search space used:   380800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)