Query= MSMg01no431_l08.b1 MSMg01no431_l08.b1 CHROMAT_FILE:
MSMg01no431_l08.b1 PHD_FILE: MSMg01no431_l08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:08 2005
(458 letters)
>mm_chr3_127185372_127186229
Length = 858
Score = 847 bits (438), Expect = 0.0
Identities = 450/454 (99%)
Strand = Plus / Plus
Query: 5 gaattcaaagaaattctactgcctctgcctccaaagtgctggggtcaaaggcatacatta 64
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaagaaattcgattgcctctgcctccaaagtgctggggtcaaaggcatacatta 264
Query: 65 ccaccgcctggctgctttctccgtttctatgtagactccagagagttaactcggattgcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccaccgcctggctgctttctccgtttctatgtagactccagagagttaactcggattgcc 324
Query: 125 agccttgtgcaaaagcacctttaccctctaatccttctctctgccccaaagaaagacctt 184
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 325 agccttgtgcaaaagcacctttaccctctaacccttctctctgccccaaagaaagacctt 384
Query: 185 tgagcaagagtgaacccagggtctctcgcacaggaaagcatctgctgggggctgggggct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgagcaagagtgaacccagggtctctcgcacaggaaagcatctgctgggggctgggggct 444
Query: 245 gggagcgcaactcacttggcagggttcctagtatacaggaagctgggactttagtctcca 304
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 445 gggagcgcaactcacttggcagggttcctagtatacaggaagctgtgactttagtctcca 504
Query: 305 gcaacacataagccagaaaccatagctcatgctgattgggtcacaatcacaggatgattg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcaacacataagccagaaaccatagctcatgctgattgggtcacaatcacaggatgattg 564
Query: 365 gaggcgggtgtggtgggaatgacaccgcaacactgcaagcattaacaggaaagatgtcaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaggcgggtgtggtgggaatgacaccgcaacactgcaagcattaacaggaaagatgtcaa 624
Query: 425 aagcatggctttggcttagcaagtcacctgggat 458
||||||||||||||||||||||||||||||||||
Sbjct: 625 aagcatggctttggcttagcaagtcacctgggat 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_l08.g1 MSMg01no431_l08.g1 CHROMAT_FILE:
MSMg01no431_l08.g1 PHD_FILE: MSMg01no431_l08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:08 2005
(163 letters)
>mm_chr3_127226639_127227201
Length = 563
Score = 275 bits (142), Expect = 1e-78
Identities = 157/164 (95%), Gaps = 4/164 (2%)
Strand = Plus / Minus
Query: 1 aaggattaaagaaccttaggtaagaactataccattgagccataccttaaccctaacatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaggattaaagaaccttaggtaagaactataccattgagccataccttaaccctaacatg 261
Query: 61 cacatctgtgataacaggttaatcaggtgttaaacaggtgtgtgcatgttttggcacata 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 260 cacatctgtgataacaggttaatcaggtgttaaacaggtgtgtgcgtgttttggcacata 201
Query: 121 tgtg----cgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 160
|||| ||||| |||||||||||||| |||||||||||||||
Sbjct: 200 tgtgtgtgcgtgtatgtgtgtgtgtgtgcgtgtgtgtgtgtgtg 157
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 163
Length of database: 563
Length adjustment: 8
Effective length of query: 155
Effective length of database: 555
Effective search space: 86025
Effective search space used: 86025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
