Query= MSMg01no431_n13.b1 MSMg01no431_n13.b1 CHROMAT_FILE:
MSMg01no431_n13.b1 PHD_FILE: MSMg01no431_n13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:20 2005
(246 letters)
>mm_chr3_85702558_85703203
Length = 646
Score = 453 bits (234), Expect = e-132
Identities = 243/246 (98%)
Strand = Plus / Plus
Query: 1 gtatgaataatttaaatccacggagttatcctaataatattgacttcttatatgtcatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtatgaataatttaaatccacggagttatcctaataatattgacttcttatatgtcatta 260
Query: 61 gactgtagttcctcagccattcccacttccataattcatagtctcatccaaactttggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gactgtagttcctcagccattcccacttccataattcatagtctcatccaaactttggaa 320
Query: 121 aggtggacctgctaggagggtcactgttctaatttaaaacacaatataaatcaactgtat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 aggtggacctgctaggagggtcactgttctaatttaaaacacaatataaatcaattgtag 380
Query: 181 tcacacaaatggttacaatgactcatgaaaacaaatctatatacgaacactgggaatcac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccacacaaatggttacaatgactcatgaaaacaaatctatatacgaacactgggaatcac 440
Query: 241 ccacta 246
||||||
Sbjct: 441 ccacta 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no431_n13.g1 MSMg01no431_n13.g1 CHROMAT_FILE:
MSMg01no431_n13.g1 PHD_FILE: MSMg01no431_n13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:20 2005
(409 letters)
>mm_chr3_85909808_85910619
Length = 812
Score = 716 bits (370), Expect = 0.0
Identities = 384/392 (97%), Gaps = 7/392 (1%)
Strand = Plus / Minus
Query: 1 cttaaattgtttgacattgcacagaatcccaagtgaaacttagtcccccttgaatgaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 cttaaattgtttgacattgcacagaatcccaagtgaaacttagtcccccttgaatgaaca 329
Query: 61 gttttggcatagaatggccatagcattaaca---cactaattaattagccctgtattcat 117
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 328 gttttggcatagaatggccatagcattaacacaccactaattaattagccctgtattcat 269
Query: 118 ggtaaggtaaaatgctgaggggtgtgagttcagtgccaattgttcggtggtaatgtcctg 177
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ggtaaggtaaaatgctaaggggtgtgagttcagtgccaattgttcggtggtaatgtcctg 209
Query: 178 gttttaccacttaaatctctaacgtggtctcattctccttatttgtgtaatggggataat 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gttttaccacttaaatctctaacgtggtctcattctccttatttgtgtaatggggataat 149
Query: 238 aaaagtatctaatctacaaggctagttttgaatagtgcctagctaataattagttctcga 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 aaaagtatctaatctacaaggctagttttgaatagtgcctagctaataattagttctcga 89
Query: 298 cacataccaattactatgttactttatgtattaagtagtctatcccaaagactatgcctt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 cacataccaattactatgttactttatgtattaagtagtctatcccaaagactatgcctt 29
Query: 358 gggtttgggtagttaaagtttcattagtttat 389
||||||||| |||||||||||||||||||
Sbjct: 28 gggtttggg----taaagtttcattagtttat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 812
Length adjustment: 9
Effective length of query: 400
Effective length of database: 803
Effective search space: 321200
Effective search space used: 321200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
