Query= MSMg01no432_c24.b1 MSMg01no432_c24.b1 CHROMAT_FILE:
MSMg01no432_c24.b1 PHD_FILE: MSMg01no432_c24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:49 2005
(498 letters)
>mm_chr3_68699798_68700695
Length = 898
Score = 922 bits (477), Expect = 0.0
Identities = 492/501 (98%), Gaps = 7/501 (1%)
Strand = Plus / Plus
Query: 5 gaattcaacaaattctccatccttatactcagcaacctactagccctcaccctagctgtt 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 198 gaattcaacaaattctccatccttatactcagcaacctactagccctcaccctaactgtt 257
Query: 65 tccctcctgcctcaggctaacctcttcacatccctgacccctggaggacactgccttcag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tccctcctgcctcaggctaacctcttcacatccctgacccctggaggacactgccttcag 317
Query: 125 gaaccagagccaagttctcttgacaacttctcatctcctgcctcctg-------tctctg 177
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 318 gaaccagagccaagttctcttgacaacttctcatctcctgcctcctgcctcctgtctctg 377
Query: 178 cgcgctcactctcctcactcccagtctctccagagtactgtgaactgactgttcatcagc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cgcgctcactctcctcactcccagtctctccagagtactgtgaactgactgttcatcagc 437
Query: 238 tacacttcagaaatctttgtttaatgtggagctagggatcaatacctcatagatgctagg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tacacttcagaaatctttgtttaatgtggagctagggatcaatacctcatagatgctagg 497
Query: 298 ccagggctctataactgacctacagccttgggcctaggaactttgctaaaactatcagct 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ccagggctctataactgacctacagccttgggcctaggaactttgctaaaactatcagct 557
Query: 358 gtttgcaatccttatcctgtcttatagccttctctgtgcaacaagaattaacacttgttt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gtttgcaatccttatcctgtcttatagccttctctgtgcaacaagaattaacacttgttt 617
Query: 418 atgtcaagccttgatctaagtacggggttcaataatggatgaaaacattaaaaaaacact 477
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 618 atgtcaagccttgatctaagtatggggttcaataatggatgaaaacattaaaaaaacact 677
Query: 478 atcttcatagataataaagac 498
|||||||||||||||||||||
Sbjct: 678 atcttcatagataataaagac 698
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_c24.g1 MSMg01no432_c24.g1 CHROMAT_FILE:
MSMg01no432_c24.g1 PHD_FILE: MSMg01no432_c24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:49 2005
(414 letters)
>mm_chr3_68841465_68842278
Length = 814
Score = 801 bits (414), Expect = 0.0
Identities = 414/414 (100%)
Strand = Plus / Minus
Query: 1 aaagaaagtgcaaattaaaaagaaatcagtgcttttttttttttaaatagtgaatgcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aaagaaagtgcaaattaaaaagaaatcagtgcttttttttttttaaatagtgaatgcagt 555
Query: 61 gtgttattaatttgaaggtcatgcctaaaaccttaaatgtgttctagatgtgtactacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gtgttattaatttgaaggtcatgcctaaaaccttaaatgtgttctagatgtgtactacat 495
Query: 121 gtagacttaactgtttttgttttgacaggaaatgcacaattttgaggaggagttaacgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gtagacttaactgtttttgttttgacaggaaatgcacaattttgaggaggagttaacgtg 435
Query: 181 tcccatctgttacagcatctttgaagatccccgtgtactaccatgctctcatacattttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tcccatctgttacagcatctttgaagatccccgtgtactaccatgctctcatacattttg 375
Query: 241 tagaaactgtttggaaaatgttcttcaggcatctggtaacttttacatatggaggcctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tagaaactgtttggaaaatgttcttcaggcatctggtaacttttacatatggaggcctct 315
Query: 301 gcgaattccactcaagtgtcctaactgcagaagtattattgaaattgcttctactggcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gcgaattccactcaagtgtcctaactgcagaagtattattgaaattgcttctactggcat 255
Query: 361 agaatccttacctgtaaactttgcattacgagcaattattgaaaagtaccagca 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 agaatccttacctgtaaactttgcattacgagcaattattgaaaagtaccagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
