XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
CACCTGAGTTTCACCTGAAAAATGTCCAACATCCTTAATCATCAGGAAAA
TGCAAATCAAAACAACCCTGAGATTCCACCTTACACCAGTCAGAATGGCT
AAGATCAAAAATTCAGATGACAGCAGATGCTGGCGTGGATGTGGAGAAAG
AGGAACACTCCTCCATTGTTGGTGAGATTGCAAGCTTGTACAACCACTCT
GGAAACCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCAGAG
GATCCCGCAGTACCTCTCCTGGGTATATATCCAGAAGATGTCCCAACCGG
TAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATTT
CCAGAAGCTGGAAAGATTCCAGATGCCCCTCAACAGAGGAATGGATACAG
AAAATGTGATATATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAA
GGAATTTAAGGGCATCATCCTCAGTGATGTAACCCAATCACGAAAGAACT
TACACAACATGTACTCACTGATAAGTGGATATTAGCCCAGACACTTATAA
TACCCAAGATATAAGATTCAATTTGCGAAAAACCTGAAATTCATGAAGAA
TGAAGACCCAAGCGTGGACACTTTGCCCCTTCTTATAATTTGGAACCAAA
CCCCTCTGGGAAGTAGTATCCCAGACAAAGTTTTGTTTTGACATTTATAA
ATGGACCCTTCAAACACGGCCCATCTCGGTCAN

AGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXTCGCCATTCCTATTGAGAAAATATCATTACTTGGAATATTAG
AAATAGAGAAATCAGGATAGAGATGAATTGAATGCTTCCTAAAGGGGCTA
TTTCGAGAGAATTCTTGTTAGTGATCCTTTGGTACAGACTACCCATGTTA
TCCACACACCAGACATTCCATGACTGATGTAAGCGTTGGTATATTGTGAC
TGGAGCAGTCAACAGTATTCTACCTGGATGTGTAGATTGATTGCTAGTGG
TTGGCAGTGTCTGGTACCTTAATTCATGACAAAATTTTGAGAGAAGGAAA
AATCATAGGCAACAGTGATGGCATCTCCCATTTATCATGTTGCTTTCTAA
AATATTTTCATGCATGTATATTCCTACTGCCTTCTGCACCTGAACATCCC
TCTTAAGGTAAAATGTATTTGCAATAAAGGTTCATGTCATAGGTGGACAA
AGCAATGACAAAAATATCTTTCTGGTTTAATAAGTTGGCTTTGAATCTTA
ATATAATACATAATTTCCTATTTCTTTTATGGCTTTAGAACTCTTCTTTT
GTTTCCTTTTTTTTTAATGTGATTACTGTCTACACCACTTTATATTCTGT
TATGGTTTTGTCGCTGTATTTTCTCCTCTTTGTCTGCCCTTCTTTTCTCG
TCTTTTTTCCTCCCTTCCCTTTCTTATTCTTCTCATCCCTTTTCCCTTCT
CTCTTTGCCCTACCTAGTTTCCTCTATCTCCTTACTG

Query= MSMg01no432_d03.g1 MSMg01no432_d03.g1 CHROMAT_FILE:
MSMg01no432_d03.g1 PHD_FILE: MSMg01no432_d03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:50 2005
         (434 letters)



>mm_chr3_46214644_46215480
          Length = 837

 Score =  799 bits (413), Expect = 0.0
 Identities = 430/437 (98%), Gaps = 3/437 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcctattgagaaaatatcattacttggaatattagaaatagagaaatcaggatagagat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 637 ttcctattgagaaaatatcattacttggaatattagaaatagagaaatcaggagagagat 578

                                                                       
Query: 61  gaattgaatgcttcctaaaggggctatttcgagagaattcttgttagtgatcctttggta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gaattgaatgcttcctaaaggggctatttcgagagaattcttgttagtgatcctttggta 518

                                                                       
Query: 121 cagactacccatgttatccacacaccagacattccatg---actgatgtaagcgttggta 177
           |||||||||||||||||||||||| |||||||||||||   |||||||||||||||||||
Sbjct: 517 cagactacccatgttatccacacagcagacattccatgcctactgatgtaagcgttggta 458

                                                                       
Query: 178 tattgtgactggagcagtcaacagtattctacctggatgtgtagattgattgctagtggt 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tattgtgactggagcagtcaacagtattctacctggatgtgtagattgattgctagtggt 398

                                                                       
Query: 238 tggcagtgtctggtaccttaattcatgacaaaattttgagagaaggaaaaatcataggca 297
           ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 397 tggcagtgtctggtaccttaactcatgacaaaactttgagagaaggaaaaatcataggca 338

                                                                       
Query: 298 acagtgatggcatctcccatttatcatgttgctttctaaaatattttcatgcatgtatat 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 acagtgatggcatctcccatttatcatgttgctttctaaaatattttcatgcatgtatat 278

                                                                       
Query: 358 tcctactgccttctgcacctgaacatccctcttaaggtaaaatgtatttgcaataaaggt 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tcctactgccttctgcacctgaacatccctcttaaggtaaaatgtatttgcaataaaggt 218

                            
Query: 418 tcatgtcataggtggac 434
           |||||||||||||||||
Sbjct: 217 tcatgtcataggtggac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 837
Length adjustment: 9
Effective length of query: 425
Effective length of database: 828
Effective search space:   351900
Effective search space used:   351900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)