Query= MSMg01no432_f02.b1 MSMg01no432_f02.b1 CHROMAT_FILE:
MSMg01no432_f02.b1 PHD_FILE: MSMg01no432_f02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:00 2005
(411 letters)
>mm_chr3_108287754_108288564
Length = 811
Score = 737 bits (381), Expect = 0.0
Identities = 396/401 (98%)
Strand = Plus / Plus
Query: 11 tcttaaagataaagagacagagacagagatagagatatttgtctcacatgttgggaagga 70
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 tcttaaagagaaagagacagagacagagatagagatatttgtctcacatgttgggaagga 270
Query: 71 aagaggttccaaagagagtgagatgggcatggaagatgaacgtgttcaaaatatgttatg 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aagaggttccaaagagagtgagatgggcatggaagatgaacgtgttcaaaatatgttatg 330
Query: 131 tacataaaattatcaaagactaagtaaacagtattaaaagcagaccagagcagttgggtg 190
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 331 tacataaaattatcaaagactaagtaaacagtattaaaagcagaccagagcagtcgggtg 390
Query: 191 cagcagaggccaccctgtgccttcactagcccctccctttcttctagcatttctcgaccc 250
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cagcagaggccaccctgcgccttcactagcccctccctttcttctagcatttctcgaccc 450
Query: 251 agttaccatgcggtgttttgcatgttttgaaatgccacataaatatcattcttagttttc 310
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 agttaccacgcggtgttttgcatgttttgaaatgccacataaatatcattcttagttttc 510
Query: 311 taaaactaatttagttgggacagagatttctatacaatggtgtggaatttatccaaattc 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 taaaactaatttagttgggacagagatttctatacaatggtgtggaatttatccaaattc 570
Query: 371 atgcacatagatctttttctgtgtgtgagtatacacacaca 411
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 571 atgcacatagatctttttctgtgtgtgagtacacacacaca 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_f02.g1 MSMg01no432_f02.g1 CHROMAT_FILE:
MSMg01no432_f02.g1 PHD_FILE: MSMg01no432_f02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:00 2005
(451 letters)
>mm_chr3_108451600_108452449
Length = 850
Score = 841 bits (435), Expect = 0.0
Identities = 447/451 (99%), Gaps = 1/451 (0%)
Strand = Plus / Minus
Query: 1 tttctcacatttcatgggcttccttcactgtttagtgtatcttttgggcttatagttttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tttctcacatttcatgggcttccttcactgtttagtgtatcttttgggcttatagttttt 513
Query: 61 gaggagaacgaaatatctttgattgaaaaaagaaaaacaaaaagaagggggaaattttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gaggagaacgaaatatctttgattgaaaaaagaaaaacaaaaagaagggggaaattttaa 453
Query: 121 ttaggctgtgaaatttaaattagacctggggagtccgacacctcctttgggacaaactcc 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 452 ttaggctgtgaaatttaaattagacctggggagtccgacacct-ctttgggacaaactcc 394
Query: 181 tttctcacatgctgagagcagctagaagcacagacaccttggccttggcagttccttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tttctcacatgctgagagcagctagaagcacagacaccttggccttggcagttccttttg 334
Query: 241 tgtataaagttcagaatctgttcaacccgtgggggaagacagtgtagagagacaaaaagt 300
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 333 tgtataaagttcagaatctgttcaacccgtgggggaagacagtgtagacagacagaaagt 274
Query: 301 gagcgcatggacctgaatagttgctaaaatcatttctggtgctataagacaatgcaataa 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gagcgcatgtacctgaatagttgctaaaatcatttctggtgctataagacaatgcaataa 214
Query: 361 aagaaatgaaatggaagccagtgagtggctcaagagtaaaggtgcctggccacaacacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 aagaaatgaaatggaagccagtgagtggctcaagagtaaaggtgcctggccacaacacaa 154
Query: 421 gcctgacaacttaagtctgacccctggaacc 451
|||||||||||||||||||||||||||||||
Sbjct: 153 gcctgacaacttaagtctgacccctggaacc 123
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 850
Length adjustment: 10
Effective length of query: 441
Effective length of database: 840
Effective search space: 370440
Effective search space used: 370440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
