Query= MSMg01no433_p17.b1 MSMg01no433_p17.b1 CHROMAT_FILE:
MSMg01no433_p17.b1 PHD_FILE: MSMg01no433_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:14 2005
(361 letters)
>mm_chr3_34390916_34391676
Length = 761
Score = 621 bits (321), Expect = 0.0
Identities = 351/365 (96%), Gaps = 7/365 (1%)
Strand = Plus / Plus
Query: 4 ggaattcatgtctcttccaaagtggtacagcaggaaccatgaggctggctgactaacagg 63
|||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatgtcacagctaaagtggtacagcaggaaccatgaggctggctgactaacagg 263
Query: 64 tttatacttacataactttcttatatacctgcttaggaatggaaacctccctccagcccc 123
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 264 tttatacttacataactttcttatatacctgcttaggaatggaaacccccctccagcccc 323
Query: 124 cc-------gccaatgatcttgaccctccagcatcatttaactatagagataactcttca 176
|| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccccccccacccaatgatcttgaccctccagcatcatttaactatagagataactcttca 383
Query: 177 caggcatgcctacagactttcctcccagatgattctaaattgtagatgttggaggtttaa 236
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 384 caggcatgcctacagactttcctcccagatgattctaaattgtggatgttggaggtttaa 443
Query: 237 aactatccattgccacttgtcaaaaactcagttggctgtagatatttgtcctgctttcta 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aactatccattgccacttgtcaaaaactcagttggctgtagatatttgtcctgctttcta 503
Query: 297 gactctcaactctgcttcactgctgtgtgaatctattgggaaactactgtcacactgttg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gactctcaactctgcttcactgctgtgtgaatctattgggaaactactgtcacactgttg 563
Query: 357 gccat 361
|||||
Sbjct: 564 gccat 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_p17.g1 MSMg01no433_p17.g1 CHROMAT_FILE:
MSMg01no433_p17.g1 PHD_FILE: MSMg01no433_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:14 2005
(239 letters)
>mm_chr3_34542043_34542681
Length = 639
Score = 462 bits (239), Expect = e-135
Identities = 239/239 (100%)
Strand = Plus / Minus
Query: 1 ttagatcgctggcctgataatctttaaagccttcttcttagctggggctctgacttttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttagatcgctggcctgataatctttaaagccttcttcttagctggggctctgacttttat 380
Query: 61 ctctcctcccacccttcttggatttttgttggcggcccccactccttcttcctctctcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ctctcctcccacccttcttggatttttgttggcggcccccactccttcttcctctctcac 320
Query: 121 cccccctcccttaatttggagatcactgacacgctatgctgtaatgagtccttcagaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cccccctcccttaatttggagatcactgacacgctatgctgtaatgagtccttcagaaac 260
Query: 181 tgttatgatctatggtgacagtctctacacctaattcacagcttattgacaagcaccgt 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgttatgatctatggtgacagtctctacacctaattcacagcttattgacaagcaccgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
