XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAATGA
GACATTACCTGGAGCCAATCTGGGGGAAGTTAGAAGAGCAGAAATGTTTA
TCTGAAAAAAATGTAAAAATCTAGTTTTAATCAAAGAAAAATAAGAAAAA
TACTCATCTCAGTTCTGAGTGGGAAAAGCTCAAATGCTGTCAGTACCTAC
TGTATTGTTTATCATGAAATTTCCACGGCACACATCCTTGAAAACTTTTT
ACTACATTAAAATAGTTTGGAATTAGCCAGGAACCACATATAATGAAGTG
AACTTTAGAATGTTCGAGTTCTGAATTTCTTGCTGAAAAACTGACTTGTG
TACTTTATCCCTCTTTACATGCAGTGCAACTGAAGTTCAAAGGATTTACC
AGATTTCGACCAGTTGTGGCCTTCGATTTCCCTTCTTGTAATTGCCATAA
AAATATACTTTTCTTTTGTAGTTAGAAACTTTTGCTTTGTAGATGAAACT
TTTTACAAGATTTTACAATGGAGTGACCCTCTTTGAGGCTGACTGTCCAA
TTCTTGAAGGACAGTCACCTGAAAGCAATAAAGTGACTGATAAAAGGATC
TGAATTTGAAGCTGGTCCTGTAATCTGAACCTGCTGCCTTATATTTGGNC
TACAGTTATTTCCCTAAAACTTTCCTCATAGGTGAGCTGTAAAATTGGAA
AAAATATTCCTGATTTGGCTGTAAAAGGTAACCCACAGCATTTTTGGT

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTTGTTCAGCTCTGAGCCCCATTTTTAATGGGGT
TATTTGATTTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGAT
ATTAGTCCCTACATAACTCTTAAACTGACAAATTTCTCTGACACTGAGAA
CTAAAAGCACGGCTACTTTTGGAATACAGTTTCTGTGTGCTGACCTTGAG
GAAACACTTTTCAAAGATTTCACCTTCATGATGCTAGGTTCTTCTTAAGC
ACTCCAAATCTCCTAACTCCATCTATCCACCACCACGTGTGCTAGTAACA
GAGGTTTCACTTTATGTGTGCCTTTCTCTTGTGAATCACAGAAAATCCTT
CATTTCGGCTGACCAGAACAACAGTCTCTTAATTCAAATAAGCAAGCAGC
CCTGATAGAACCTGTAAACTTCCCTCTAAAAGAAGACAGACCTCCATTTT
TTGCACTGCTTTCAACATCCTTATCTCCCTACCTCCCATAAAGTAGCTCA
CTGAGTTCTCAACACTCAATGTCATTTCTAACCCAAAGTTCCAAAGTCCT
TCAACAATTCTCCCAAACAAGATAACTAGGGAATATAGTAGCTATAGCCT
ACTAAGCTGGTGCCCACTTGTCTTAATTACCGTTACTAAAAAGAAATTTA
AGACCATATCTGAAGAATAAAAGGATCTGAAAGGTTATAGA

Query= MSMg01no434_d23.b1 MSMg01no434_d23.b1 CHROMAT_FILE:
MSMg01no434_d23.b1 PHD_FILE: MSMg01no434_d23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:36 2005
         (576 letters)



>mm_chr3_74627582_74628559
          Length = 978

 Score =  984 bits (509), Expect = 0.0
 Identities = 558/575 (97%), Gaps = 4/575 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaatgagacattacctggagccaatctgggggaagttagaagagcagaaatgttt 64
           |||||||||||||||  |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 gaattcaatgagacaagaagtggagccaatctgggggaagttagaagagcagaaatgttt 719

                                                                       
Query: 65  atctg--aaaaaaatgtaaaaatctagttttaatcaaagaaaaataagaaaaatactcat 122
           |||||  ||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 718 atctgaaaaaaaaatgtaaaaatctaattttaatcaaagaaaaatgagaaaaatactcat 659

                                                                       
Query: 123 ctcagttctgagtgggaaaagctcaaatgctgtcagtacctactgtattgtttatcatga 182
           ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ctcagttctgattgggaaaagttcaaatgctgtcagtacctactgtattgtttatcatga 599

                                                                       
Query: 183 aatttccacggcacacatccttgaaaactttttactacattaaaatagtttggaattagc 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 aatttccacggcacacatccttgaaaactttttactacattaaaatagtttggaattagc 539

                                                                       
Query: 243 caggaaccacatataatgaagtgaactttagaatgttcgagttctgaatttcttgctgaa 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 caggaaccacatataatgaagtgaactttagaatgttcgagttctgaatttcttgctgaa 479

                                                                       
Query: 303 aaactgacttgtgtactttatccctctttacatgcagtgcaactgaagttcaaaggattt 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aaactgacttgtgtactttatccctctttacatgcagtgcaactgaagttcaaaggattt 419

                                                                       
Query: 363 accagatttcgaccagttgtggccttcgatttcccttcttgtaattgccataaaaatata 422
           |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 418 accagatttcgaccagttgtggccctcaatttcccttcttgtaattgccataaaaatata 359

                                                                       
Query: 423 cttttcttttgtagttagaaacttttgctttgtagatgaaactttttacaagattttaca 482
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 cttttcttttgtagccagaaacttttgctttgtagatgaaactttttacaagattttaca 299

                                                                       
Query: 483 atggagtgaccctctttgaggctgactgtccaattcttgaaggacagtcacctgaaagca 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 atggagtgaccctctttgaggctgactgtccaattcttgaaggacagtcacctgaaagca 239

                                              
Query: 543 ataaagtgactgata-aaaggatctgaatttgaag 576
           | ||||||||||||| |||| ||||||||||||||
Sbjct: 238 agaaagtgactgatacaaag-atctgaatttgaag 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 978
Length adjustment: 10
Effective length of query: 566
Effective length of database: 968
Effective search space:   547888
Effective search space used:   547888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)