Query= MSMg01no435_i02.b1 MSMg01no435_i02.b1 CHROMAT_FILE:
MSMg01no435_i02.b1 PHD_FILE: MSMg01no435_i02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:16 2005
(204 letters)
>mm_chr3_88294274_88294878
Length = 605
Score = 354 bits (183), Expect = e-102
Identities = 198/203 (97%), Gaps = 3/203 (1%)
Strand = Plus / Minus
Query: 4 ggaattccgcctctagtgcccaaggagtcagggctaggaggcgtcctc-aggctaagcat 62
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 393 ggaattccgcctctagtgcccaaggagtcagggctaggaggtgtcctcgaggctaagcat 334
Query: 63 cctcagctcagtcagagatgagtttgttgaaagggatccactcctgctcctggcttcttt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 cctcagctcagtcagagatgagtttgttgaaagggatccactcctgctcctggcttcttt 274
Query: 123 ctgcagtctctccacccacagagcttaggagggcagtggggggcgggggagagtgtgaga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ctgcagtctctccacccacagagcttaggagggcagtggggggcgggggagagtgtgaga 214
Query: 183 atgtcagctt-gtacattgcccc 204
|||||||||| | ||| ||||||
Sbjct: 213 atgtcagcttag-acactgcccc 192
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 605
Length adjustment: 8
Effective length of query: 196
Effective length of database: 597
Effective search space: 117012
Effective search space used: 117012
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no435_i02.g1 MSMg01no435_i02.g1 CHROMAT_FILE:
MSMg01no435_i02.g1 PHD_FILE: MSMg01no435_i02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:16 2005
(406 letters)
>mm_chr3_88124965_88125770
Length = 806
Score = 770 bits (398), Expect = 0.0
Identities = 404/406 (99%)
Strand = Plus / Plus
Query: 1 catttccctacttagctttggcttatacaaaagcagtgtaacgggatgagttatatccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catttccctacttagctttggcttatacaaaagcagtgtaacgggatgagttatatccct 260
Query: 61 tgcttaggtagaacttcattgttcattcaagactctgaaaaggaagattccagataaaat 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 tgcttaggtagaacttcattgttcattcaagactctggaaaggaagattccagataaaat 320
Query: 121 ggtaattctgtgggaggagctaggagaaggctaaaagaaaacagtgtctttcccttctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtaattctgtgggaggagctaggagaaggctaaaagaaaacagtgtctttcccttctct 380
Query: 181 gctgacctgtttttctcttagactgcagttctgcttctgcggattgatgacattgtctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctgacctgtttttctcttagactgcagttctgcttctgcggattgatgacattgtctct 440
Query: 241 ggccacaagaagaagggtgatgaccagaaccggcaaactggtgctccagatgctggccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggccacaagaagaagggtgatgaccagaaccggcaaactggtgctccagatgctggccag 500
Query: 301 gagtgagtgctgagcacggtgacttccatgcacagaaccagcagtctcccctttcctgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagtgagtgctgagcacggtgacttccatgcacagaaccagcagtctcccctttcctgag 560
Query: 361 ccagagttccaggaacactgtggacgtctttgtttgcgaaggatca 406
||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 ccagagttccaggaacactgtggacatctttgtttgcgaaggatca 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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