Query= MSMg01no435_i13.b1 MSMg01no435_i13.b1 CHROMAT_FILE:
MSMg01no435_i13.b1 PHD_FILE: MSMg01no435_i13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:19 2005
(412 letters)
>mm_chr3_154403487_154404299
Length = 813
Score = 745 bits (385), Expect = 0.0
Identities = 403/409 (98%), Gaps = 1/409 (0%)
Strand = Plus / Minus
Query: 5 gaattcttttc-atcacactttttctattgactaatttagttttgtgtcacaaagaaata 63
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gaattcttttctatgacactttttctattgactaatttagttttgtgtcacaaagaaata 554
Query: 64 taaactaaacttctccagcatgtgtattcgaattgagaagagatcttacctactacacgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 taaactaaacttctccagcatgtgtattcgaattgagaagagatcttacctactacacgt 494
Query: 124 atttagtgtaagaaatataaagtgtaaataacagaaattatagaacatttcaatatatta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 atttagtgtaagaaatataaagtgtaaataacagaaattatagaacatttcaatatatta 434
Query: 184 caatactgtaatgcttgacattgtaataaatatgaatgttgatctcatttgcaaatatac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 caatactgtaatgcttgacattgtaataaatatgaatgttgatctcatttgcaaatatac 374
Query: 244 tgagttaacttcattctgatttttatttttatatttcatttactccttaccttagtcatt 303
||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 373 tgagttaacttcattctgatttttaaaattatatttcatttactccttaccttagccatt 314
Query: 304 gaagagtttagtttaaatatgttgttgttgtcatactcatgaacccattttggttttgaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gaagagtttagtttaaatatgttgttgttgtcatactcatgaacccattttggttttgaa 254
Query: 364 acaaaaccattttctcttttaccctacataaatctcctgggtttgcttt 412
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 acaaaaccattttctcttttaccctacataaatctcctgggtttgcttt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 813
Length adjustment: 9
Effective length of query: 403
Effective length of database: 804
Effective search space: 324012
Effective search space used: 324012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_i13.g1 MSMg01no435_i13.g1 CHROMAT_FILE:
MSMg01no435_i13.g1 PHD_FILE: MSMg01no435_i13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:19 2005
(239 letters)
>mm_chr3_154231780_154232418
Length = 639
Score = 410 bits (212), Expect = e-119
Identities = 230/236 (97%)
Strand = Plus / Plus
Query: 1 tcttcaagcacagcagagagagggcgggggcaaagactcagtaactgaccaacggctctc 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 201 tcttcaagcacagcagagagagggtgggggcaaagactcagtaactgaccaacggctatc 260
Query: 61 ttgtgtttgcaacaaataaagctattagatacatatccgtgtggtttagagaaggaaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 ttgtgtttgcaacaaataaagctattagatacatatccgtgtggtttagagaaaaaaaga 320
Query: 121 gtaatttaaaacaagctttaaaaacctaattttaaaaaactacaacaaaatgaaactttg 180
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 gtaatttaaaacaagctttgaaaacctaattttaaaaaactacgacaaaatgaaactttg 380
Query: 181 taaagcacaggcatttaagcttcttggaaatagtaatcagtgagacaaagactaaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaagcacaggcatttaagcttcttggaaatagtaatcagtgagacaaagactaaa 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
