NGGTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTGTGGTTAACGAATATTTACTTAAGAACAAAAGTATATTAA
AAGCTCCAGAAATACAGGTAAGTCTAGTACAGGATGAAGAATTCGTCTTG
GTAGAGTAGATTTAGCAATAGTAAGAAAGGAGCTTCTTAAAATTGTTGAC
CATTGGGGTGGAGAAATCTGTACTAGGAAACCATGAGTGGTTCTTTAAAG
TGGAAGTAAAAAGAATGAATGTGTCATGGGTAGACAATGTAAATATGTAA
GTATTCTTGATGAGAGAAAAGATGGTACATGGGATGCTCTGTTGCTGGCC
TGTGAACCATATTATGAAATCCAAAATAATGGAAAGAAGCTGGCAAATTT
TGATTTTTAATGTGTTAAGATATTTTAGCAACAGAAGGATTGTATGTATA
GAACTACCAACTGGCAAATGAAACCCATCCAATCATGGTAAGTGTGGATG
AAGATCAGTAAAAGGCCATTTGTATAGAAGTAATATTGGAATCCATGATG
ATACCTGGAATCTCTGTTTGAACAGAGATACAAGAACAATAGCAATAAAG
TATTCTTTGCTCAAAGGGGTGTGAGAAAGATAGGAGCATAAAAAAAAATA
AGGCACAGGAATGTTTACTATAGAGGTCAAGAAGACAAGCATGAATTGTG
TTCTGTACTATCTGAGAGCGGACCTTACTACTTATTCTTTTTGN

GGACCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAGAAGTCTTTAATTTCTTT
GTTTCTTTTCCATGCCCCAGTGATCACTGAGTCGAGAGTTGTTCACTACC
TATGAGTTTGTAGGCTTTTCGTTGTCTTTTGTTGTTCAAGTCCAGCATTA
AACCTTGGTGGTCTGATAAGACAGAAGTCATTCTTTCATTTTCTTGAATC
TGCTGAGGTTTTTGTTGTGACCTTTTGGAGAAGGTGCCCTGAGGTGCTAA
GAAGAGGGTATATTGCTTTTGTGTTTGGGTGAAATGTTCAATAGATATCA
GATAGGTCTGTTTGAATCACAACCTCTTTTAGTTACATTATTTTTCTGTT
TAGTTTCCATCTTGATGCCCTGCCCATTGGTGAGAGTGAGATGTTAAAGT
CTCCATTATTAATATATGTGTTCCCACGTGCTGTTTAAGTATTAATATTT
TTTTGCGAATGTCACTGTGTCTTTGTGTTTGGCATATATATTTTATATTG
AAATGCCCTCTTCGCGAAATTTTTACTTCTAATAATATATTGCCATCTTT
TTCCTTTTATTCTTGTATACCCCCCTCTTTCTTCTCTTTTTTATTATTCA
CTTCTCTATTGTCTTCTATCATTTCTTTTTTATTTTTTTTTCGTCTTCCT
TTTCTCTTCTTTTCTTCTTCCCCCTTTATTATTTCCCTCACCTATTCTTC
CTGTTCACCTTTTCCACAACTCATTCCATCCTG

Query= MSMg01no436_e02.b1 MSMg01no436_e02.b1 CHROMAT_FILE:
MSMg01no436_e02.b1 PHD_FILE: MSMg01no436_e02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:16 2005
         (526 letters)



>mm_chr3_75144823_75145748
          Length = 926

 Score =  911 bits (471), Expect = 0.0
 Identities = 510/523 (97%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctgtggttaacgaatatttacttaagaacaaaagtatattaaaagctccagaaa 63
           ||||||||||||  || ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 726 ggaattctgtggagaaggaatatttatttaagaacaaaagtatattaaaagctccagaaa 667

                                                                       
Query: 64  tacaggtaagtctagtacaggatgaagaattcgtcttggtagagtagatttagcaatagt 123
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 666 tacaggtaagtctagtacaggatgaagaattcgtcttggcagagtagatttagcaatagt 607

                                                                       
Query: 124 aagaaaggagcttcttaaaattgttgaccattggggtggagaaatctgtactaggaaacc 183
           |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 606 aagaaaggagcttcttaacattgttgaccattggggtggagaactctgtactaggaaacc 547

                                                                       
Query: 184 atgagtggttctttaaagtggaagtaaaaagaatgaatgtgtcatgggtagacaatgtaa 243
           |||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 546 atgagtggttgtttaaagtggaagtaatatgaatgaatgtgtcatgggtagacaatgtaa 487

                                                                       
Query: 244 atatgtaagtattcttgatgagagaaaagatggtacatgggatgctctgttgctggcctg 303
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 486 atatgtaagtattcttgatgagagaaaagatggcacatgggatgctctgttgctggcctg 427

                                                                       
Query: 304 tgaaccatattatgaaatccaaaataatggaaagaagctggcaaattttgatttttaatg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tgaaccatattatgaaatccaaaataatggaaagaagctggcaaattttgatttttaatg 367

                                                                       
Query: 364 tgttaagatattttagcaacagaaggattgtatgtatagaactaccaactggcaaatgaa 423
           ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 366 tgttaagatcttttagcaacagaaggattgtatgtatagaactaccaactggcaaacgaa 307

                                                                       
Query: 424 acccatccaatcatggtaagtgtggatgaagatcagtaaaaggccatttgtatagaagta 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 acccatccaatcatggtaagtgtggatgaagatcagtaaaaggccatttgtatagaagta 247

                                                      
Query: 484 atattggaatccatgatgatacctggaatctctgtttgaacag 526
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atattggaatccatgatgatacctggaatctctgtttgaacag 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space:   472656
Effective search space used:   472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)