NAAAGTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTTTATATATGCTGGATATTAGTCCCCTATCTGATTTAG
GACAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTTTTTGTCTTATTG
ACAGTGTCTTTTGCCTTGCAGAAGCTTTGCAATTTTATGAGGTCCCATTT
ATCGATTCTGGATCTAACAGCACAAGCCATTACTGTTCTATTCAGGAATT
TTTCCCCTGTACCCATATCTTCGAGGCTTTTCCCTACTTTCTCCTCTATA
AGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAATCCACTTAGATTT
GACCTTAGTACAAGGAGATAGGAATGGATCAATTTGCATTCTTTACACGA
TAACCGCCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCTTTTTTCC
ACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGTGT
GGGTACATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTGTCTGTG
GCTATACCAGTACCGTGCAGTTTTTATCACAATTGCTCTGTAGTACAGCT
TTAGGTCGGACATGGTGATTCCACCAGAGGTTCTTTTATCATTCAGAACA
GTTTTTGTTATCCTAGGTTTTTTGTTATTCCAGATGAATTTGGAGATTGC
CCTTTTCNATTCTTTGATGAATTGAGTTTGACATT

CCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTGTTGACATGAGGAGTTGGGCTT
GATGCATATTGAACTCTGTGGGGCTGGCCCCAACTCCTTCACACTCTTAT
TCATCAACAACTTTTTGGTCTTTAGGTGAGTGAAATAGCAGTACATAAAA
CTCTTAAGTGACTGCTAATGTTAAAAAATAGAATCAATATATTATCAGCT
GCATTACATCTTAGAACTTTCCCACCTTTGGTATTTAATAATTTTAAAAT
TTAATAACTTTCAAAGTTGGAATGTCTTTGGAGTTCAGTGCAGGTATTGG
GAGGAGACCTTAGAAGATTTACAAGTGGAGTTAGGCATTGAAAAAGCCAA
ACATGAGTTAGCTTTATACAAATTTATAACTAGCACACAGTGTTAAAAGG
TAAGGTGGCTTTTTAAAAATACTTCCCAAAAATCTTTGGGGTGACTTTCA
TACTTGTTTTATAAACTAATAAAACCATATGCTTCTTAAGTAGTAGTTTA
TATAAAGAGAAATAAAAAGTCTCTCTTTCTTAATATGTTTTAGGTAAATG
TAGATATTTTGGCTAATATTATCCAGATGTTTTTTCCATCTTTAAATCCT
TTTGCAGGTGTTAATCTAAACTCCTAAGAACTGATTTTGTTATGAAGAAT
ATTCTACTAGGAAAAGACTCATTACAATGTATTN

Query= MSMg01no436_h01.g1 MSMg01no436_h01.g1 CHROMAT_FILE:
MSMg01no436_h01.g1 PHD_FILE: MSMg01no436_h01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:30 2005
         (553 letters)



>mm_chr3_157833650_157834602
          Length = 953

 Score = 1054 bits (545), Expect = 0.0
 Identities = 551/553 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgttgacatgaggagttgggcttgatgcatattgaactctgtggggctggccccaactc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgttgacatgaggagttgggcttgatgcatattgaactctgtggggctggccccaactc 260

                                                                       
Query: 61  cttcacactcttattcatcaacaactttttggtctttaggtgagtgaaatagcagtacat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttcacactcttattcatcaacaactttttggtctttaggtgagtgaaatagcagtacat 320

                                                                       
Query: 121 aaaactcttaagtgactgctaatgttaaaaaatagaatcaatatattatcagctgcatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaactcttaagtgactgctaatgttaaaaaatagaatcaatatattatcagctgcatta 380

                                                                       
Query: 181 catcttagaactttcccacctttggtatttaataattttaaaatttaataactttcaaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catcttagaactttcccacctttggtatttaataattttaaaatttaataactttcaaag 440

                                                                       
Query: 241 ttggaatgtctttggagttcagtgcaggtattgggaggagaccttagaagatttacaagt 300
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 ttggaatgtctttggagttcagtgcaggtattgggaggagacctcagaagatttacaagt 500

                                                                       
Query: 301 ggagttaggcattgaaaaagccaaacatgagttagctttatacaaatttataactagcac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggagttaggcattgaaaaagccaaacatgagttagctttatacaaatttataactagcac 560

                                                                       
Query: 361 acagtgttaaaaggtaaggtggctttttaaaaatacttcccaaaaatctttggggtgact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acagtgttaaaaggtaaggtggctttttaaaaatacttcccaaaaatctttggggtgact 620

                                                                       
Query: 421 ttcatacttgttttataaactaataaaaccatatgcttcttaagtagtagtttatataaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcatacttgttttataaactaataaaaccatatgcttcttaagtagtagtttatataaa 680

                                                                       
Query: 481 gagaaataaaaagtctctctttcttaatatgttttaggtaaatgtagatattttggctaa 540
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gagaaataaaaagcctctctttcttaatatgttttaggtaaatgtagatattttggctaa 740

                        
Query: 541 tattatccagatg 553
           |||||||||||||
Sbjct: 741 tattatccagatg 753


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space:   512049
Effective search space used:   512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)