Query= MSMg01no437_h01.b1 MSMg01no437_h01.b1 CHROMAT_FILE:
MSMg01no437_h01.b1 PHD_FILE: MSMg01no437_h01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:50 2005
(503 letters)
>mm_chr3_53944459_53945363
Length = 905
Score = 683 bits (353), Expect = 0.0
Identities = 387/399 (96%), Gaps = 2/399 (0%)
Strand = Plus / Minus
Query: 4 ggaattctgggatgtgcaagtacagtacctcattaaa--aagaattactctacctacctc 61
|||||||||||| | | |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 399 ggaattctgggaaggggaagtacagtacctcattaaaggaagaattactctacctacctc 340
Query: 62 tttatcatatcttacggtgagcccaccttaaggggaagtccctctttcctaactataagt 121
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tttattatatcttacggtgagcccaccttaaggggaagtccctctttcctaactataagt 280
Query: 122 aacctgctcacccagaaagttaagtctctactcaggtcagactgactatatgaatggtct 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aacctgctcacccagaaagttaagtctctactcaggtcagactgactatatgaatggtct 220
Query: 182 atctgtatggacagctacacgccaataaagggcattagatcacattaccgatgatgtgag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 atctgtatggacagctacacgccaataaagggcattagatcacattaccgatgatgtgag 160
Query: 242 ctaccacgtggttgctggggactgaactcaggacctctggaagagcagtcaatgctctca 301
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 159 ctaccatgtggttgctggggactgaactcaggacctctggaagagcagccaatgctctca 100
Query: 302 accgcttaggcacctctcctgtctttttctaaggtttttatctctgacaaagtctattga 361
|||||| || || ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 99 accgctgagccatctctcctgtctttttctaaggcttttatctctgacaaagtctattga 40
Query: 362 atgtctttaatcccaattgcatacccaggcatcttatcg 400
|||||||||||||||||||||||||||||||||||||||
Sbjct: 39 atgtctttaatcccaattgcatacccaggcatcttatcg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 905
Length adjustment: 10
Effective length of query: 493
Effective length of database: 895
Effective search space: 441235
Effective search space used: 441235
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_h01.g1 MSMg01no437_h01.g1 CHROMAT_FILE:
MSMg01no437_h01.g1 PHD_FILE: MSMg01no437_h01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:50 2005
(375 letters)
>mm_chr3_53774720_53775494
Length = 775
Score = 685 bits (354), Expect = 0.0
Identities = 369/374 (98%)
Strand = Plus / Plus
Query: 1 actcaggaactaggtccagactcttgccaccagtgacctcaggtggcattgggcagcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actcaggaactaggtccagactcttgccaccagtgacctcaggtggcattgggcagcaat 260
Query: 61 aagacagtctgatgtgctcagatgaccagagaaggaagcagcacttcttggtacacaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagacagtctgatgtgctcagatgaccagagaaggaagcagcacttcttggtacacaaaa 320
Query: 121 ccaaggtgatacaatgaaaggtggcttgtgtgacattggtgctcttaactcagcagcaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaaggtgatacaatgaaaggtggcttgtgtgacattggtgctcttaactcagcagcaac 380
Query: 181 ttatttttggtcccctcacagttctctctggtgactgagatgtttgcattgtggtccctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttatttttggtcccctcacagttctctctggtgactgagatgtttgcattgtggtccctt 440
Query: 241 aaagccaacaacgtctgcagacagggccaagaggagttctgaagcagaggaaaaggatca 300
|||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagccgacgatgtctgcagacagggccaagaggagttctgaagcagaggaaaaggatca 500
Query: 301 caagagcattctatgttaaggggatgtaagccaccatatactgtataaggaaaagcaaga 360
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 501 caagagcattctatgttaaggggatgtaagccaccgtatactgtagaaggaaaagcaaga 560
Query: 361 ctaaagacagagtc 374
||||||||||||||
Sbjct: 561 ctaaagacagagtc 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
