NTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTTGTTCTGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGAT
TTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTAGATATTAGTCC
CCTATCTGATGTGGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCC
TTTTTGTCTTATTGATGGTGTCGTTTGCTCTGTAGAAGCTTTGCCATTTT
ATGAGGTCCCATTTGTCAATTCTTGATCTTACAGCACAAGCCATTGCTGT
TCTATTCAGGAATATTTCCCCTGTACCCATATCTTCGAGGCTTTTCCCTA
CTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTA
ATTCACTTAGATTTGACCTTAGTACAAGGAGATAGAAATGGATCAATTCG
CATCCTTCAACATGATAACCGCCAGTTGTGCCAGCACCATTTGTTGAAAA
TGCTGTCTTTTTTCCACTGGATGGTTTTAGCTCCTTTGTCAAAGATCAAG
TGACCATAGGTATGTGGATTCATCTCTGGGTCTTCAATTCTGTTCCATTG
GTCTACTTGTCTGTCACAATACCAGTTCCATGGAGTTTTGATCACAATTG
CTCTGTAGTACAGTTTTAGGTCCTGCATGGTGATTCCACCAGAGGTTCTT
TTATCCTTGAGAAGAGCTTTTCTATCCTCGGTTTTTTGTATTTCCGAT

ACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCATAAATAGGTATATTTATTACA
AAGGAATCAACACTTTTAAGTAGTTAAGGAGCTAAGAACTCTTATATGAC
ACATTTACTTATAATAGTATTATAGTTATGCCTTCAGCTTAAATAACTTC
CATTTCTTTTTCCATTCTCATCCTATATATTATTATTACATGGAATTTCT
TGTTCTAATTTGGACCTCATAGTTCTCTGATTTTTCCCCTATTATTACAT
TAGAAATATTTAGTGTCTTTAAATTCTCAGTTTCTATCTGTGGTCCACTT
TTTTGACAGAAAAGTTTTGGCTTTATTACTGTCTGAATGAGATCGTCATC
ATTATCATCTGTGCTCCAACACTGATGGGCGTACTGTCTTATGGCATGTG
CCTTAAAAATATTCAAAAAAGGATGATATCTTTTCTCTACCTTCCTGGTC
CCCAGGCCTATGGCAGGCAATCAATTTAGCTGGTCCTGGGTCCTACCAAA
CATTTGCCTTTGCTTTTTATGTGTTTGTATCCAGAATAGTAGAAAGGAAT
ACCGTCACTGGTACTATGGGACTAAGAGAAGGAGCTATAGGTTTCCTTCC
TGCTCTGTGATTCTCTGTACTTGATGACGGCTTTCTGTCTTTCTGGAGAG
CTGACCTTCACAGGAGGGTTCAAAAAGTAGCCCCTAGGGACAGGCGATAG
AGAGGG

Query= MSMg01no437_l11.g1 MSMg01no437_l11.g1 CHROMAT_FILE:
MSMg01no437_l11.g1 PHD_FILE: MSMg01no437_l11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:12 2005
         (565 letters)



>mm_chr3_14377603_14378567
          Length = 965

 Score = 1069 bits (553), Expect = 0.0
 Identities = 562/565 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cataaataggtatatttattacaaaggaatcaacacttttaagtagttaaggagctaaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cataaataggtatatttattacaaaggaatcaacacttttaagtagttaaggagctaaga 260

                                                                       
Query: 61  actcttatatgacacatttacttataatagtattatagttatgccttcagcttaaataac 120
           ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 actcttatatgacacatttccttataatagtattatagttatgccgtcagcttaaataac 320

                                                                       
Query: 121 ttccatttctttttccattctcatcctatatattattattacatggaatttcttgttcta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttccatttctttttccattctcatcctatatattattattacatggaatttcttgttcta 380

                                                                       
Query: 181 atttggacctcatagttctctgatttttcccctattattacattagaaatatttagtgtc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttggacctcatagttctctgatttttcccctattattacattagaaatatttagtgtc 440

                                                                       
Query: 241 tttaaattctcagtttctatctgtggtccacttttttgacagaaaagttttggctttatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttaaattctcagtttctatctgtggtccacttttttgacagaaaagttttggctttatt 500

                                                                       
Query: 301 actgtctgaatgagatcgtcatcattatcatctgtgctccaacactgatgggcgtactgt 360
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actgtctgaatgagatcatcatcattatcatctgtgctccaacactgatgggcgtactgt 560

                                                                       
Query: 361 cttatggcatgtgccttaaaaatattcaaaaaaggatgatatcttttctctaccttcctg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttatggcatgtgccttaaaaatattcaaaaaaggatgatatcttttctctaccttcctg 620

                                                                       
Query: 421 gtccccaggcctatggcaggcaatcaatttagctggtcctgggtcctaccaaacatttgc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtccccaggcctatggcaggcaatcaatttagctggtcctgggtcctaccaaacatttgc 680

                                                                       
Query: 481 ctttgctttttatgtgtttgtatccagaatagtagaaaggaataccgtcactggtactat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctttgctttttatgtgtttgtatccagaatagtagaaaggaataccgtcactggtactat 740

                                    
Query: 541 gggactaagagaaggagctataggt 565
           |||||||||||||||||||||||||
Sbjct: 741 gggactaagagaaggagctataggt 765


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space:   530025
Effective search space used:   530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)