NTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCATCTGAGGAATACTGAATGGCTAAGAAGCACCTGAAAAAAT
GTTCAGGATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGA
TTCCACCTCACACCAGTCAGAATGGCTAAAATCAAAAATTCGGGTGACAG
CAGATGCTGGCAAGGATGTGGAGAAAGGATCACTCCTCCATTTTTGGTGG
GATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCAGTTCCTCAG
AAAATTGAACATAGTACTACTAGAGGATCCCGCAATACCTCTCCTGGGCA
TATATCCAGAAGATGTTCCAAGTGGTAAGAAGGACACATGCTCCATTATG
TTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATA
TCCCTCAACAGAGGAATGGATACAGAAAATGTGGTGCATTTACACAATGG
AGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCTTAAGCAAA
TGGATGGACCTGGAGGGGATCATCCTGAGTGGAGTAACCCCATCACAAAA
GAATCCCATGATATGAACTCCCTGAAAAGGGGAAATTAACCCCAAAACTT
AAAATACCCAGGAACCAGGAAACATTTTCTTACGCATGGAACTTCCGAAG
GGTGAAAAAAAAGGGGGGGCCTTTGCCCCTCCAAAAGGAA

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTGTGCTCACAAGTCTGAGCAGGGCATG
GCTGAGTGAATTTTGGCTTATATTCTCTACCATCATCTGCTTATTCACCA
AGCAAAAAGACATGAACATGAAACTCTAGCTCTAAGAGATTGGCAAAGAT
TGCAACTGAAGACCATTGGTCTATTTAGCATGTTGTTTTAATTATTTTTA
GGTAAAGATTTTTTGGGTAATGATAAACAACAGATTTTTGTTTGTTTTAA
AGCATGTTTTTGTTTTTTTTTTGNTTTGTTTCTTGTCCTCAATGCACATA
TAAAGGTTTTAACACTAGTTAATGTCTGGTCAAGGTGAGATTATATAAAC
TTCGTTTTTAATTTTGAATAAGATCTTAAAACTTAATAGTCAACAAACTC
CAAACATCTGTCAGTTGAGGCTCTAAAATAAATAAATTCATATATACATA
CATACATATATGCAAAACTATCTCCATATGCGTACATTATAAGTTTCCAG
TTATATATTCCTTGCAAATTAGCAAAATAAGACTTAAACCTTACTACCTC
CATATGAACACTCTTTTGTATTACACCGTCCCCCAAATCCTTTTCGATAT
TGCCTATGTCCTGGATCCCTACCTTTACTCCCTTTGCCCTTTTTTTTCTC
ATAAGCGCATAACAATCTGTCCCCCAATTCGCT

Query= MSMg01no439_e07.g1 MSMg01no439_e07.g1 CHROMAT_FILE:
MSMg01no439_e07.g1 PHD_FILE: MSMg01no439_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:21 2005
         (460 letters)



>mm_chr3_23851708_23852570
          Length = 863

 Score =  766 bits (396), Expect = 0.0
 Identities = 444/461 (96%), Gaps = 3/461 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgtgctcacaagtctgagcagggcatggctgagtgaattttggcttatattctctacca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgtgctcacaagtctgagcagggcatggctgagtgaattttggcttatattctctacca 260

                                                                       
Query: 61  tcatctgcttattcaccaagcaaaaagacatgaacatgaaactctagctctaagagattg 120
           ||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 261 tcatctgcttattcacctagcaaaaagacatgaacatgaaactctatctctcagagattg 320

                                                                       
Query: 121 gcaaagattgcaactgaagaccattggtctatttagcatgttgttttaattatttttagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaaagattgcaactgaagaccattggtctatttagcatgttgttttaattatttttagg 380

                                                                       
Query: 181 taaaga--ttttttgggtaatgataaacaacagatttttgtttg-ttttaaagcatgttt 237
           ||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 taaagatgttttttgggtaatgataaacaacagatttttgtttgtttttaaagcatgttt 440

                                                                       
Query: 238 ttgttttttttttgntttgtttcttgtcctcaatgcacatataaaggttttaacactagt 297
           ||| ||  |||||| |||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 441 ttgattactttttgttttgtttcttgtactcaatgcacatataaaggttttaaaactagt 500

                                                                       
Query: 298 taatgtctggtcaaggtgagattatataaacttcgtttttaattttgaataagatcttaa 357
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 taatgtctggtcaaggtgagattatatgaacttcgtttttaattttgaataagatcttaa 560

                                                                       
Query: 358 aacttaatagtcaacaaactccaaacatctgtcagttgaggctctaaaataaataaattc 417
           |||||||||| |||||| ||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 561 aacttaatagccaacaacctccaaacatctgtcagttgaggttttaaaataaataaattc 620

                                                    
Query: 418 atatatacatacatacatatatgcaaaactatctccatatg 458
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atatatacatacatacatatatgcaaaactatctccatatg 661


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 863
Length adjustment: 10
Effective length of query: 450
Effective length of database: 853
Effective search space:   383850
Effective search space used:   383850
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)