Query= MSMg01no439_i19.b1 MSMg01no439_i19.b1 CHROMAT_FILE:
MSMg01no439_i19.b1 PHD_FILE: MSMg01no439_i19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:42 2005
(461 letters)
>mm_chr3_122936768_122937628
Length = 861
Score = 816 bits (422), Expect = 0.0
Identities = 449/458 (98%)
Strand = Plus / Minus
Query: 4 ggaattctttaggagctacgaaccaacagcagataaaatgtgaatgccggattcagcaca 63
||||| |||||||||| | ||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 661 ggaatcctttaggagccaggaaccaacagcagataaaacgtgaatgccagattcagcaca 602
Query: 64 ttgcacggcctaggagacgaaggcagatttgctcagtcgtagttggttggttggctccct 123
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 601 ttgcacggcctaggagacgaaggcagatttgctcagtcgtagctggttggttggctccct 542
Query: 124 gtcagccgagatttgggttctacttgcagttcggcctgaggctcgtcaatcaccagccct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtcagccgagatttgggttctacttgcagttcggcctgaggctcgtcaatcaccagccct 482
Query: 184 gactcagttgccatggaagaggagatgttgcctgggatagggaaagagaaactccaggaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gactcagttgccatggaagaggagatgttgcctgggatagggaaagagaaactccaggaa 422
Query: 244 gaaaccgttgctcactcactcactagtcctaacattatgtgcttcagggtcccccgcccg 303
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 421 gaaaccgttgctcactcactcactagtcctaacagcatgtgcttcagggtcccccgcccg 362
Query: 304 ctgactgcagtgtggggacaggggtggctgagagctgtggttctgcacaggatttgccat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgactgcagtgtggggacaggggtggctgagagctgtggttctgcacaggatttgccat 302
Query: 364 ggccaaaccgggaaggcacagtggatggtgggtttcttctgagttctctgatgcactggc 423
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggccaagccgggaaggcacagtggatggtgggtttcttctgagttctctgatgcactggc 242
Query: 424 tagtttaactctgtgaagccagttgctgagggaagggt 461
||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagtttaactctgtgaagccagttgctgagggaagggt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_i19.g1 MSMg01no439_i19.g1 CHROMAT_FILE:
MSMg01no439_i19.g1 PHD_FILE: MSMg01no439_i19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:42 2005
(247 letters)
>mm_chr3_122771686_122772330
Length = 645
Score = 455 bits (235), Expect = e-132
Identities = 244/247 (98%), Gaps = 2/247 (0%)
Strand = Plus / Plus
Query: 1 agtttatgcaattacccaacaagttggttttgcttcccatactgagataacaccagggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtttatgcaattacccaacaagttggttttgcttcccatactgagataacaccagggag 260
Query: 61 agggtgactagtaccagttggcaaggtaggaactgaagtagatgctgcagacctagacaa 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 agggtgactagtaccagttggcaaggtaggaactgaagtagatgctgtagacctagacaa 320
Query: 121 gagcctgctgaggtgcaaaggaacatggatagcaaaactgggggaatggactgatgatat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagcctgctgaggtgcaaaggaacatggatagcaaaactgggggaatggactgatgata- 379
Query: 181 atccctctagaggagcagtgggaactgagcaagagactggttagtactgacaaggccaat 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 a-ccctctagaggagcagtgggaactgagcaagagactggttagtactgacaaggccaat 438
Query: 241 ggccttc 247
|||||||
Sbjct: 439 ggccttc 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 645
Length adjustment: 9
Effective length of query: 238
Effective length of database: 636
Effective search space: 151368
Effective search space used: 151368
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
