TTCTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAAGAGGA
TCCGCGGAACTCCTGTCTCTTCCCACAAACAAACAAACAAACAAACAAAC
AAAGAAAAACAAGTATTGTGGATAATAAAACTTCCATAGGTTTCTTTTGG
CTGCCTATGGGAAGAAAGTACACCATTGCTACTAGAATAATAACTATTTG
CAAGGAAAACAATCTATTGCTGAGCCAAAAAAGTCAATCTGTCTCTTTCA
AATAGACACTAAGGATTGTGGAGTCTTGCTCTCCTCATAAAATATAAATC
TTCTACTATCTGCTTCATTATTGTTTAATGTCTGTTTTTCACATTTTTCA
ATGCTTCTCAGTAGTCACTCTTCTGACAGATAACTCTACAAATGATTGGA
GAAAAAGGAGAATAAACCAACTCTGAATTTAAAAATTAGATGTCTATGAT
CATGGTCTTATGCACAAGAACAGGCACCTGCGGTGGTGATGCAGACCAGG
CCGGATGTTGTCTCCTGCAGCGTTGACTCTATTGGATTAGATGAAAAATG
TATTTAATTTCTGACAAAGGAGGAATAGGTTGATTTTTTTCAGCAAGTGT
TAACCATGAGCACTGGCTGTAAAGCTGCTTAATCAACACCAACATCTGGG
AACAAAGAAGATCAATAACCCTGACTTCTCAAGTTAGGAGATATATTTAT
GTCCCAGCTATTCAACAGCTGTGTGGTCTTGCGCTTTCATAGATGAGGCC
CG

NCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAAT
GGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAA
TGTAAATCAAAACAACACTGAGATTCCACTTCACTCCAGTCAGAATGGCT
AAGATCAAAAACTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAA
GGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCT
GGAAATCAGTATGGCGGTTCCTCAGAATATTGTACATAGTACTACCATAG
GATCCCACAATACCTCTCCTGGGCATATATCCAGAAGATGTCCTAACCGG
TAAGAAGAACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAG
CCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAG
AAATTGTGGTACATTTACACAGTGGAATACTACTCAGCTATTAAAAAAAT
GAATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCT
TAGTGAGGAAACCCAATCACAAAGGAACTCGCACAATATGTACTTCACAG
ATAATCGGATATTACGCCAGAATCTTATGATACCCCAGCATATAGAAACA
ACTTGCCCTACGTTTTGAAATTCTGAAAGAACGAAAATCAAATTGGGGTC
CCTG

Query= MSMg01no440_g06.b1 MSMg01no440_g06.b1 CHROMAT_FILE:
MSMg01no440_g06.b1 PHD_FILE: MSMg01no440_g06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:49 2005
         (519 letters)



>mm_chr3_18492045_18492963
          Length = 919

 Score =  926 bits (479), Expect = 0.0
 Identities = 506/519 (97%), Gaps = 7/519 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaacaaacaaacaaacaaacaaacaaagaaaaacaagtattgtggataataaaacttcca 60
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 611 aaacaaacaaacaaacaaacaaacaaacaaaaacaagtattgtggataataaaacttcca 552

                                                                       
Query: 61  taggtttcttttggctgcctatgggaagaaagtacaccattgctactagaataataacta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 taggtttcttttggctgcctatgggaagaaagtacaccattgctactagaataataacta 492

                                                                       
Query: 121 tttgcaaggaaaacaatctattgctgagccaaaaaagtcaatctgtctctttcaaataga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tttgcaaggaaaacaatctattgctgagccaaaaaagtcaatctgtctctttcaaataga 432

                                                                       
Query: 181 cactaaggattgtggagtcttgctctcctcataaaatataaatcttctactatctgcttc 240
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cactgaggattgtggagtcttgctctcctcataaaatataaatcttctactatctgcttc 372

                                                                       
Query: 241 attattgtttaatgtctgtttttcacatttttcaatgcttctcagtagtcactcttctga 300
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 attattgtttaatggctgtttttcacatttttcaatgcttctcagtagtcactcttctga 312

                                                                       
Query: 301 cagataactctacaaatgattggagaaaaaggagaataaaccaactctgaatttaaaaat 360
           |||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||
Sbjct: 311 cagataactctacaaatgtttggagaaaaaggagaataagccaaatctgaatttaaaaat 252

                                                                       
Query: 361 tagatgtctatgatcatggtcttatgcacaagaacaggcacctgcggtggtgatgcagac 420
           ||||||||||||||||||||       |||||||||||||||||||||||||||||||||
Sbjct: 251 tagatgtctatgatcatggt-------acaagaacaggcacctgcggtggtgatgcagac 199

                                                                       
Query: 421 caggccggatgttgtctcctgcagcgttgactctattggattagatgaaaaatgtattta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 caggccggatgttgtctcctgcagcgttgactctattggattagatgaaaaatgtattta 139

                                                  
Query: 481 atttctgacaaaggaggaataggttgatttttttcagca 519
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 138 atttctgacaaaggaggaataggttgatttttttcagca 100


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space:   462681
Effective search space used:   462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)