TTTTTTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAAAGG
ATCCGCGGAATTCATAGATTCTCTGGCAGCCTGCATAGGTCCAAGTAGGA
TGATATCCCAATGCTAATAGGGAGAATTGGACACAAAGTAGACAAATCCC
TACTCAAAGGCCTATTTGTTAGCATTTCTCCTTGACTCTGCCCCATAGTT
ACCTGGCAACAGCCATGTATGCCCAACTCACTATCAAAGGTGCTGCTTGT
CCCAACCTCTCTCTCTTGTTCTTTTCTTGCTCTCTCACCCTCTTCTCCTT
CTGTCCTTTCTCTTCTCATACCCCTCCTCCTTCTCTCCACATGTTTATGG
CTGGCCTCTTCTACCTTCTCTCTCTCTCTCTCTCTCCTTCTCTCTCTCTT
CTCTCTCTCTCTCTGTCTCTACTACCTCCTCAACTCTCCTCACCATGCCT
AAATAAACTCTATTTCCATACTATATCCATATGGTTCAAGGGGAAAGGAT
GTCTCAGCATGGGCCTGCAGAGACACCCTCTTCTTCTTCCTCTATACCAT
ACCAGGCCTCCACCAAACATATTCCTGCTGTCTTTTCTTTTTATAAAACA
CAATACTATCTCCAATTGACCACCACTTGCATAGGAAAAATTAACTGTCT
CCAATGGATTTTTACTGGGCAAACAAACCCACTTTTAGTGGGAAGGCCCT
ATGCCCAACCACCTGAATGGCCATCTCAAAACAAATTTCTCGGATT

NNNCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGTTAAAAAAAAACAGC
TCACTAGTTTTTAAAATATATCTATTAATTGTCTGCAGCTATTGAAGTTT
TATCATATAAATTGTTTCCTTCTTCTGTTACCTTGTAAATAATATGTCTT
CTTCCCTCTACCCAAGAGGTCCCTGACAGATTTTTTTTCATTATTGCTTT
TATTTTATAATTTTAATAGGTATTTTGAGATAGTTTTGTCACTATTCATT
TTTACCAGACCTTTATTAATGTAAAGATTCATAAAATTAATAATTTTTAC
AAAGTTAAGAAAATTTGAAACTAGCCGGGCGTGGTGGCGCACGCCTTTAA
TCCCAGCACTTGGGAGGCAGGGGCAGGTGGATTTCTGAGTTCGAGGCCAA
CCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACC
CTGTCTCGAAAAACCTTATTTTATATCATTATACATAAAGACAATTTGAA
ACTTATTTTTTATTCTTTCCCCTTTTCCCATTTTCCTCTAAGGTTCTTTT
AACTAATGAGGCTCTCACAATTGCTTAAGAATTTCCTAAAACTTCCAAAA
TTTTAATTATGCCGTTGTCTCTTTTTATCATTTATAAATCCTCATTTGTA
TTCTTCATTTATAATAATTCCTCTGTACTTTATAGACATACATTTATAAG
AA

Query= MSMg01no440_o11.g1 MSMg01no440_o11.g1 CHROMAT_FILE:
MSMg01no440_o11.g1 PHD_FILE: MSMg01no440_o11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:30 2005
         (427 letters)



>mm_chr3_18258596_18259422
          Length = 827

 Score =  748 bits (387), Expect = 0.0
 Identities = 419/431 (97%), Gaps = 4/431 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgtt--aaaaaaaaacagctcactagtttttaaaatatatctattaattgtctgcagct 58
           |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ttgtttaaaaaaaaaacagctcactagtttttaaaatatatctattaattgtctgcagct 256

                                                                       
Query: 59  attgaagttttatcatataaat--tgtttccttcttctgttaccttgtaaataatatgtc 116
           ||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||
Sbjct: 257 attgaagttttatcatataaattctgtttccttcttttgttaccttgtaaataatatgtc 316

                                                                       
Query: 117 ttcttccctctacccaagaggtccctgacagattttttttcattattgcttttattttat 176
           ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 317 ttcttccctctacccaagaggtctctgccagattttttttcattattgcttttattttat 376

                                                                       
Query: 177 aattttaataggtattttgagatagttttgtcactattcatttttaccagacctttatta 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aattttaataggtattttgagatagttttgtcactattcatttttaccagacctttatta 436

                                                                       
Query: 237 atgtaaagattcataaaattaataatttttacaaagttaagaaaatttgaaactagccgg 296
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 437 atgtaaagattcataaaattaataatttttacgaagttaagaaaatttgaaactagccgg 496

                                                                       
Query: 297 gcgtggtggcgcacgcctttaatcccagcacttgggaggcaggggcaggtggatttctga 356
           | ||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||
Sbjct: 497 gtgtggtggcgcacgcctttagtcccagcacttgggaggcagaggcaggcggatttctga 556

                                                                       
Query: 357 gttcgaggccaacctggtctacagagtgagttccaggacagccagggctacacagagaaa 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gttcgaggccaacctggtctacagagtgagttccaggacagccagggctacacagagaaa 616

                      
Query: 417 ccctgtctcga 427
           |||||||||||
Sbjct: 617 ccctgtctcga 627


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space:   341924
Effective search space used:   341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)