Query= MSMg01no442_c13.b1 MSMg01no442_c13.b1 CHROMAT_FILE:
MSMg01no442_c13.b1 PHD_FILE: MSMg01no442_c13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:12 2005
(380 letters)
>mm_chr3_131556312_131557091
Length = 780
Score = 642 bits (332), Expect = 0.0
Identities = 368/380 (96%)
Strand = Plus / Plus
Query: 1 gaagcagaggctgctgtgaagttacctgaaaacctctctggagcccacagcgtttctgtc 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaagcagaggctgccgtgaagttacctgaaaacctctctggagcccacagcgtttctgtc 260
Query: 61 agctcatcagatgacacctgtctctctttctatacacaggggggctcaccactgcagagt 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctcatcagatgtcacctgtctctctttctatacacaggggggctcaccactgcagagt 320
Query: 121 gccatccttgtatcgtgctttaaggtctggccttttctctctgacacatttaatgataag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccatccttgtatcgtgctttaaggtctggccttttctctctgacacatttaatgataag 380
Query: 181 gattttgtgtcccagattgtaatattcaatgtcaattactgcttactcttagcacatcag 240
||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 381 gattttgtgtcccagattgtaatattcaacatcaattactgcttgctcttagcacatcag 440
Query: 241 aaattcttgtgtttgttcatccctcagtccaaggtgcctctccaggttggggagctttga 300
||||||||||| ||| ||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 441 aaattcttgtgcttgctcatccctcagtccaaggtgcctgtctaggttggggagctttga 500
Query: 301 cttggtctgatgagaatggttcaataacttaaacttacctcctggcaccaatgcaagctt 360
|||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||
Sbjct: 501 cttggtctgatgagaatggttcaatatcttaaacttacctcctgggaccaatgcgagctt 560
Query: 361 caggtctgattattggtctc 380
||||||||||||||||||||
Sbjct: 561 caggtctgattattggtctc 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no442_c13.g1 MSMg01no442_c13.g1 CHROMAT_FILE:
MSMg01no442_c13.g1 PHD_FILE: MSMg01no442_c13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:12 2005
(245 letters)
>mm_chr3_131750862_131751508
Length = 647
Score = 462 bits (239), Expect = e-135
Identities = 243/245 (99%), Gaps = 2/245 (0%)
Strand = Plus / Minus
Query: 3 ttacttttaaagtaaatatttacatattcaatttgaggagttgaagtgactaagttgcaa 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttacttttaaagtaaatatttacatattcaatttgaggagttgaagtgactaagttgcaa 388
Query: 63 actcttt--aaaaaaaaacacatacacacaacataattaaggagttttttgagggacggc 120
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 actctttaaaaaaaaaaacacatacacacaacataattaaggagttttttgagggacggc 328
Query: 121 aaagataatccatggctatctgtctaagggtgtgttagcaaaacattaaaggtaagttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aaagataatccatggctatctgtctaagggtgtgttagcaaaacattaaaggtaagttaa 268
Query: 181 atttggagataagttctttagtccactctgtaaggccctcctggctgctagtagaactgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atttggagataagttctttagtccactctgtaaggccctcctggctgctagtagaactgg 208
Query: 241 tggct 245
|||||
Sbjct: 207 tggct 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 647
Length adjustment: 9
Effective length of query: 236
Effective length of database: 638
Effective search space: 150568
Effective search space used: 150568
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
