XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACGCGGAATTCC
AAAAAAACCATTACTGCCAATTTTAAAATTGGGTAAAGAGCTAAACAGAG
AATTCCCAACAGAGGACTTTTGAAAGGCCAAGAAGCACTTAAAGAAATGT
CCAGCATCTCTTTTCATCAGGGAAATGTAAATATAAAGACCCTGAGAGTC
CACCTTAAAACCAATCAGGATGGCTAAGATCAAAAACTCAAATGAAAACA
CATGCTGATGAGGATATGGGAAAAAAGGAATATTCCTCCATTACTGATAG
GATTGCAAACTGGTATACTTTCTTTTTAAATCAATCTGACAGTTCCTCAG
AATATTGGATATAGTTCTACCTGAATACTCAGCTATATAGTATTGGTGTA
CTTATAACCCAAGATGCTTCTACCTTATCTTAAGGACATGGTCCACTGTT
TTCATAGGAGTTTTCCTCAGCCACGTATAGGTGACTGCTCTTTCCAACTC
CATTATGTATCACTGTCACCCACCCCTAGTTACATCCTTGGTCATCTTGT
CCTCGCGTCTATGTTTAAGCCTCTTTCGCTCTTATTTACCCGTTTCGCCC
CGCTCATGAATCCTTTTTCTTTTTCCCTTTTTCCCCCCACCTCTCCCTCT
CTTAGATAATTAATCCCTCCCCTTCCCTCAAAAGTTTATATACAGTTGTT
ATTACCTTAGCTCTGCTCATTTGTCCACTTTGTCCCCTGTCGGCTACCAC
ATTCGTCCTTACACATTTACTCTCCGATTTTTTCCTCAAAAATA

NACACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATAAAGCCACGTGATTAGC
TCTCCTAATTAGGAAGCCTGAAGTCAAGGGCATCCTGGAATTAATTTCAT
TCTGCTTCTTACTATAACATTCAGGGACAATGCTCTGAGACCCTAATCTC
TACAATGTTCTCTCGCAGCCTTTTCATACCACCTAGGGGCTCAAAGCAAT
GCTTCCTTTCCCAATTACCAGACATGGATTTCTCATATGGAAACCCCTCT
TTCCCCATGTCCACATTAATTACCCTGCATCAGCCACAATTATGAAGCTC
CTTTCTAGGTGAGTTTTCTCAATAGGCTTCTCAAGCTCCAGGTAGACAAG
CCTTTTTACCCTTGAGTACCATCTTTAAACTTCAGAGGGATTTTTTTTTC
CAGCTCATTTTTGTAGGATGGTATGAGAATCAAAGGGTCATGCATATAGC
TCAAGAGAGAAGAGATCCCAAAGTCCCTCTCTTACCCTATGTATCACATC
CACCATCCACTTCTAGGACATAACAGTTTCTTCACAAGTTAAAGAAAAAC
ACAACCAAAAATAGATTACATTCAACATCTCTTCCCGCACATCTAGTTAT
ATGCTGTTATTTGATGTTCTATTGTTGATTTTAAAAATAACACAAAGTTT
TGGTATATTTCTAACTAGCCTTCTTTATTTGGCATT

Query= MSMg01no444_e08.g1 MSMg01no444_e08.g1 CHROMAT_FILE:
MSMg01no444_e08.g1 PHD_FILE: MSMg01no444_e08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:07 2005
         (597 letters)



>mm_chr3_141251852_141252849
          Length = 998

 Score = 1102 bits (570), Expect = 0.0
 Identities = 591/598 (98%), Gaps = 1/598 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tataaagccacgtgattagctctcctaattaggaagcctgaagtcaagggcatcctggaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 tataaagccacgtgattagctctcctaattaggaagcctgaagtcaagggcatcctggaa 739

                                                                       
Query: 61  ttaatttcattctgcttcttactataacattcagggacaatgctctgagaccctaatctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ttaatttcattctgcttcttactataacattcagggacaatgctctgagaccctaatctc 679

                                                                       
Query: 121 tacaatgttctctcgcagccttttcataccacctaggggctcaaagcaatgcttcctttc 180
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tacaatgttttctcgcagccttttcataccacctaggggctcaaagcaatgcttcctttc 619

                                                                       
Query: 181 ccaattaccagacatggatttctcatatggaaacccctctttccccatgtccacattaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ccaattaccagacatggatttctcatatggaaacccctctttccccatgtccacattaat 559

                                                                       
Query: 241 taccctgcatcagccacaattatgaagctcctttctaggtgagttttctcaataggcttc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 taccctgcatcagccacaattatgaagctcctttctaggtgagttttctcaataggcttc 499

                                                                       
Query: 301 tcaagctccaggtagacaagcctttttacccttgagtaccatctttaaacttcagaggga 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 498 tcaagctccaggtagacaagcctttttacccttgagtaccatctttaaacttcagaggaa 439

                                                                       
Query: 361 tttttttttccagctcatttttgtaggatggtatgagaatcaaagggtcatgcatatagc 420
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tttttttttccagcttatttttgtaggatggtatgagaatcaaagggtcatgcatatagc 379

                                                                       
Query: 421 tcaagagagaagagat-cccaaagtccctctcttaccctatgtatcacatccaccatcca 479
           | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 taaagagagaagagattcccaaagtccctctcttaccctatgtatcacatccaccatcca 319

                                                                       
Query: 480 cttctaggacataacagtttcttcacaagttaaagaaaaacacaaccaaaaatagattac 539
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| 
Sbjct: 318 cttctaggacataacagtttcttcataagttaaagaaaaacacaaccaaaaatagattaa 259

                                                                     
Query: 540 attcaacatctcttcccgcacatctagttatatgctgttatttgatgttctattgttg 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 attcaacatctcttcccgcacatctagttatatgctgttatttgatgttctattgttg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 998
Length adjustment: 10
Effective length of query: 587
Effective length of database: 988
Effective search space:   579956
Effective search space used:   579956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)