Query= MSMg01no444_i22.b1 MSMg01no444_i22.b1 CHROMAT_FILE:
MSMg01no444_i22.b1 PHD_FILE: MSMg01no444_i22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:29 2005
(441 letters)
>mm_chr3_114950884_114951724
Length = 841
Score = 824 bits (426), Expect = 0.0
Identities = 438/442 (99%), Gaps = 1/442 (0%)
Strand = Plus / Plus
Query: 1 atctaggaacgagatttgtttccacaggcagccaggagaaagctctctcttctgcactgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctaggaacgagatttgtttccacaggcagccaggagaaagctctctcttctgcactgg 260
Query: 61 gtggagcttgagcctaggatccctccaagcctgcctacacagtgtcatacttcctccaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggagcttgagcctaggatccctccaagcctgcctacacagtgtcatacttcctccaat 320
Query: 121 aaggccacacatcctaatagtgccactttctcttctcagtgggaatcctattcaaacccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggccacacatcctaatagtgccactttctcttctcagtgggaatcctattcaaacccc 380
Query: 181 cacagtagctcaaacagatatcacccactgttgacttcaattagctcagttaaaagtatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacagtagctcaaacagatatcacccactgttgacttcaattagctcagttaaaagtatt 440
Query: 241 tatgctaataagttatggcacaaagtttaatggatgttaatgtaaaacttttatttaaat 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 tatgctaaaaagttatggcacaaagtttaatggatgttaatgtaaaacttttaaataaat 500
Query: 301 ctagtaaacattttattggtgaaactttaaaaa-tatttttaaaaaatttagtaaggatt 359
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 ctagtaaacattttattggtgaaactttaaaaaatatttttaaaaaatttagtaaggatt 560
Query: 360 ttgtttgggggttttagagacaggttcttgttagttgattttggttcaaactcatgtgca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgtttgggggttttagagacaggttcttgttagttgattttggttcaaactcatgtgca 620
Query: 420 gctattgatgactctgaactgc 441
||||||||||||||||||||||
Sbjct: 621 gctattgatgactctgaactgc 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no444_i22.g1 MSMg01no444_i22.g1 CHROMAT_FILE:
MSMg01no444_i22.g1 PHD_FILE: MSMg01no444_i22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:29 2005
(242 letters)
>mm_chr3_115113146_115113787
Length = 642
Score = 443 bits (229), Expect = e-129
Identities = 238/241 (98%)
Strand = Plus / Minus
Query: 1 atgaaagctacctccctaaacctcccttcacaacttgcaggtagctgcacagatcagaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atgaaagctacctccctaaacctcccttcacaacttgcaggtagctgcacagatcagaca 261
Query: 61 gtctcctcttccggcagttgtttgggtttctggaatcctgaggaatggatttaggtgatg 120
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 260 gtctcctcttccggcagttgtttaggcttctggaatcctgaggaatggatttaggtgatg 201
Query: 121 gtttgattatgtttggctcagggagtgtcactataggaggggtagccttgttggagtagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gtttgattatgtttggctcagggagtgtcactataggaggggtagccttgttggagtagg 141
Query: 181 tgtagccttgctgaaggaagttcatcactgtcgggtgggctttgaagctcttcccagtct 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 140 tgtagccttgctgaaggaagttcatcactgtggggtgggctttgaagctcttcccagtct 81
Query: 241 g 241
|
Sbjct: 80 g 80
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
