NTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTGGACGTTCTCATCTAGGCTTTCAGGCACGTGCCATCCCCTCCA
TCTCAACAAGTGGTTGGTGTTATCCACAAAAGTGCATACACAAAATTTCT
GGTGTAGTGCTGAACGGATCAGGCATATATTGAAATAAAGCAAATTATTC
AGGATATGCAAATCAAGTGTGCAAGTTTAGCAAAGATGCAATATTATTTC
AGAAATGATTTTCCTTTCTTTCATAAATACTATCATATGTGTTGAGAATG
TTAATGTTACAAAAGACGAGCACAGCCGCTGGCATCCTAGTTCATACTGG
AGAGAATTTGTTATTATAATGTGAACATGTGTACATATTCTTGGATTCTT
TTCTTGGACATGATACATTCAATACATTTGGAATATGTGCCATTGTCCTT
AGTTTCTCTATACTAACTCCCGAAACATATCCTGGTAAGCAGGAAAAAAT
AATGTCTTACCTGGATACAAATAAGTGGTATTATAGCATAAATACAATGA
GAGCCCTACTTACTGGTTAGTTCATGGTTTGCTTAATTACTTTTTATTTT
CAAGCCACAGTATGGAAAATAGAACCAAGACCCTCCCATAAAGGGGAATT
CTTGGCTAATTCCCTGGAGAATGGAAGCCCATAAAAAAAATAAACCTGGC
TTTCTTTTATTCTTTTTAAGAAAATAAATTATTTTACTCCCCCCCGGGGA
ACCCCCTG

NCCATGAAGTGGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXAGCTGTTTCCTCTTGGAGGACTGCTCCTCTA
TTAAGGGAAAGAAGCTGGAGTGGACTGAAGAAAAGTCAGGCACCTTGAGT
ATTGGAAGGAAAGAGGGACTGTGGGTGGGAACATACTATTGGAGAAAAGA
ACCCCATTTTTTAAAAAACAGAATCACGAACCGCAAACCAAAGCACTTTT
AAACCCCAGANAAGANNTATGCTAATTGGAAGGAGGCTGGGGNAAAAGGG
GNAACCCAAAAACGTTTTTTTTTTTNCCCAAAAAGACCCAAACCCGCTAT
GTTAATTCATATTACGGCACCAGCCCCCCCACAAAAAATTTTAAATTGTC
GGGGGGGGAANNNAATGGGCAAATAAAAAAAACCCCCAAAAATTTTGAAT
CCTTTCCCGAACCTGGGAAAAAATTTTTAAAAAAATGTTGGAGAAATTCC
CCTTGGAAAACCCCCCAAAATTTAAAAAAACCCCCCCCCCCTGGGGTTCC
CCAATTGGGGACCCTGGGGAAATTTAAAAAACTCTTTTTTCAAAAAAAAA
TTTTTTTTCCCCCCACCCCCCCCCTCCAAAAAAATTTTCTGGCTTTCTCC
CCACAACCTCTTTTTTGTTTTTTTTCCTCCCGGGGTGTCTTTTCCCCCTT
CCCCCCCTCCACCATACCATTTTTATTTTGGTTGTGTT

Query= MSMg01no444_o19.b1 MSMg01no444_o19.b1 CHROMAT_FILE:
MSMg01no444_o19.b1 PHD_FILE: MSMg01no444_o19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:58 2005
         (457 letters)



>mm_chr3_70795603_70796459
          Length = 857

 Score =  808 bits (418), Expect = 0.0
 Identities = 445/454 (98%), Gaps = 2/454 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctggacgttct-catctaggctttcaggcacgtgccatcccctccatctcaacaa 63
           ||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctggacatt-tacatctaggctttcaggcacgtgccatcccctccatctcaacaa 263

                                                                       
Query: 64  gtggttggtgttatccacaaaagtgcatacacaaaatttctggtgtagtgctgaacggat 123
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 264 gtggttggtgttatccacaaaagtgcatacataaaatttctggtgtagtgctgaacggat 323

                                                                       
Query: 124 caggcatatattgaaataaagcaaattattcaggatatgcaaatcaagtgtgcaagttta 183
           ||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 324 cagacatatcttgaaataaagcaaattattcaggatatgcaaatcaagtatgcaagctta 383

                                                                       
Query: 184 gcaaagatgcaatattatttcagaaatgattttcctttctttcataaatactatcatatg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcaaagatgcaatattatttcagaaatgattttcctttctttcataaatactatcatatg 443

                                                                       
Query: 244 tgttgagaatgttaatgttacaaaagacgagcacagccgctggcatcctagttcatactg 303
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 444 tgttgagaatgttaatgttacaaaagacgagcacagccgctgacatcctagttcatactg 503

                                                                       
Query: 304 gagagaatttgttattataatgtgaacatgtgtacatattcttggattcttttcttggac 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gagagaatttgttattataatgtgaacatgtgtacatattcttggattcttttcttggac 563

                                                                       
Query: 364 atgatacattcaatacatttggaatatgtgccattgtccttagtttctctatactaactc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atgatacattcaatacatttggaatatgtgccattgtccttagtttctctatactaactc 623

                                             
Query: 424 ccgaaacatatcctggtaagcaggaaaaaataat 457
           ||||||||||||||||||||||||||||||||||
Sbjct: 624 ccgaaacatatcctggtaagcaggaaaaaataat 657


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space:   378609
Effective search space used:   378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)