Query= MSMg01no445_e10.b1 MSMg01no445_e10.b1 CHROMAT_FILE:
MSMg01no445_e10.b1 PHD_FILE: MSMg01no445_e10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:25 2005
(315 letters)
>mm_chr3_100724885_100725596
Length = 712
Score = 551 bits (285), Expect = e-161
Identities = 305/313 (97%), Gaps = 3/313 (0%)
Strand = Plus / Minus
Query: 1 actgactgatctctgaatccaaaaattgtaacagcatggctccgtagttgctatctgttc 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 510 actgactgatctctgaatccaaaaattgtaatagcatggctccgtagttgctatctgttc 451
Query: 61 acattcttcagatgcgtaagcctctgtctatctcactgttttcctttacagtcttccata 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ccattcttcagatgcgtaagcctctgtctatctcactgttttcctttacagtcttccata 391
Query: 121 tatgatttcaacccatgcatcactgtttcagggacctctttattagagatgtcatagtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tatgatttcaacccatgcatcactgtttcagggacctctttattagagatgtcatagtat 331
Query: 181 aggcatagctgtcgaagcctatgcttttacgaagtatgggccctgggtggaaagagcccc 240
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 330 aggcatagctgtcgaagcctatgcttttacgaagtatgggccttcggtggaaagagcccc 271
Query: 241 aaactatgaaaagatgaaatgaaaagaaaaaaaaaaaagaattatctgactcttcgtaaa 300
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 270 aaactatgaaaagatgaaattaaaagaaaaaaaaa---gaattatctgactcttcgtaaa 214
Query: 301 atatgttaaagta 313
|||||||||||||
Sbjct: 213 atatgttaaagta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 712
Length adjustment: 9
Effective length of query: 306
Effective length of database: 703
Effective search space: 215118
Effective search space used: 215118
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no445_e10.g1 MSMg01no445_e10.g1 CHROMAT_FILE:
MSMg01no445_e10.g1 PHD_FILE: MSMg01no445_e10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:25 2005
(406 letters)
>mm_chr3_100574202_100575009
Length = 808
Score = 704 bits (364), Expect = 0.0
Identities = 397/409 (97%), Gaps = 4/409 (0%)
Strand = Plus / Plus
Query: 1 cagatgcactgggaaggttgctgtctgctggaatgttctctttccatatattcttcagag 60
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 201 cagatgcactgggaaggttgctgtctgctggagtgttctctttccacatattcttcagag 260
Query: 61 gggatcctccttggtgctctgagctccaacctgtagggcactgtctcccttcaccctcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggatcctccttggtgctctgagctccaacctgtagggcactgtctcccttcaccctcac 320
Query: 121 atctctttctgctttagtttcactacgcgtggtcaacaacatacagtgtctgattaacgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 atctctttctgctttagtttcactacgcgtggtcaacaacatacagtgtctgaaaaacgt 380
Query: 181 tttcacttgcattatttttgaagtagactatgtctgtgacctttattttatgttgacata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcacttgcattatttttgaagtagactatgtctgtgacctttattttatgttgacata 440
Query: 241 aatan--atttgggagtttgccctctacctgaaagtgagtggtttatgtgtttgcttaat 298
| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 a-taactatttgggagtttgccctctacctgaaagtgagtggtttatgtgtttgtttaat 499
Query: 299 ttccagttttattactttgtgagatgagaaaatggctcaaacaactttttatgatttgaa 358
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 500 ttccagttttattactttgtgagatgagaaaatggctcaaataaatttttatgatttgaa 559
Query: 359 acttattgggtttatttttgtgtcccatttatgatctttttttt-ctcg 406
|||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 560 acttattgggtttatttttgtgtcccatttatgatctttttttttctcg 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 808
Length adjustment: 9
Effective length of query: 397
Effective length of database: 799
Effective search space: 317203
Effective search space used: 317203
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
