XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTC
CTTCTCCATTTCAAACAGTGTTTGACTCTAAGAACTCCACAACAAAATGA
AAGATGCAACTAATGACTAAAGGTCACTCACCATTCAGGCTGATTTTCTT
CCTCCATCAAGCTGAAAGAGTCTCATATAAAGACATTGTCAGTTTGAGAT
AAATATTTGAAGATGTACTGGCCTACGGAAAATTTCCTGACTATTTAGTC
TGCAATTTTATTCATAGCTAGGAAGTTTACAGAATAGCTCATGTTACTCT
GAAGAATTTTTTGTGAAGTAGTCAGTATTTCATTTCTACTCTGGCATGTA
AAGCAGTGAAGAGTATTTGCTCATATCTCATTTCACACCCTACACCACAA
AAAAAGAACACGGAATCTAAGTGGGAGAGTCAGGTTTGCCACAGTGACAA
AGTAACAGAAAGAAGCAAGCTAAAAGGAAAACATGTTTGATTTGCCTCAT
GCACTTAGAGATTTCAGCCCAAGGTTACTTGTCTAGTCTTGGGTGCTCTG
GGGCCTGTGGTTATTATTGAATCAGTATAAGCACGTGATGGAGCAAACTG
CTAACCTTGTAGCCTTCAAGGAGCAAAGATTGTGTGTGTTTCTCAATATG
GTCCTCTAGGGTACACCATAATGAAATATCCTTCCAGTCTTTTCACTGGG
TAAAGATTCTTTCCTGTCCTATTTTACAAATCATGTGTCCAC

AAAGAAAAGACGGGGGGGGGGCGGGATCCCTGACCGAGGGGGGGGGGGGG
GGTTATAACANAGAAAAAGGGAAGAGGGGGGGAGGACCCCGCAGAGAAGG
GGAAAGAGAGAGAGAGTTCACCCCCCACCAACAAGGCAGCAGACGAGACG
ACCCCGAGGACCCACGAGAATAACCCCGAGGGGGGCGGGGAGCAGGCCGC
ACGCCGAGCCGAGGCTGGACGCGCGGCACAAGAAGCGAGACCCAACAGCC
AGACACCGAGGGGAACCGTGTGCAGAGCGAGAGAGAGAGAAAACCAAACA
CCCGGGACGGCGGGCGCGCGAGCCAGGAAGGACCAGCATCNAGTAGATTA
TCTTTATTAGACGACGAAGACGGAGCGCCAGGAGCACACCAACGCAGGAA
TAGTATGAGCACCCACCCATCAGAAGACCAGGGGCGCCCGAACAAAGACA
CCCAAGAAGCCGGGTGCGACCACCCACACGAATCAGCAAAAAAACGAGAC
AAACAAAACAAAGGGAAAACAACCCAGAAGCAGCAGCCGAATTAACCCAA
GAAGACACACAAACCAACCATACACCACCGCCTACGCACGAAACCACAAA
GTAGAAACAACACTCATAGACTCGAAGAAAAAACACACAACCGCATAACG
CACTCAGGAATCACACAGAATACACACCAGTGAACCCAGACAACGCCGAA
GACATAAAGATAGCCCGCAACGGCCCAAAACCACACGAACAACCGCCCAC
AAAATAAGAATAAAATAAACGACCACTACTCGCCTTACCTACCACCACAA
AANAGGGATGGAGAGACACACCCCCCGGGCGCAAACACCACACGACACAC
AGATAACAACAAAAGAGCGAGCCAGCAGCACGCAACAAGAGACAGATATG
TACGCTATACACACCGCGCCGCGACGAACAAGAGCGCGCGATAGACTGGA
CGCCCGCGCAGATG

Query= MSMg01no445_f22.b1 MSMg01no445_f22.b1 CHROMAT_FILE:
MSMg01no445_f22.b1 PHD_FILE: MSMg01no445_f22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:32 2005
         (521 letters)



>mm_chr3_14003863_14004785
          Length = 923

 Score =  940 bits (486), Expect = 0.0
 Identities = 513/528 (97%), Gaps = 12/528 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   acagtgtttgactctaagaactccacaacaaaatgaaagatgcaactaatgactaaaggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagtgtttgactctaagaactccacaacaaaatgaaagatgcaactaatgactaaaggt 260

                                                                       
Query: 61  cactcaccattcaggctgattttcttcctccatcaagctgaaagagtctcatataaagac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactcaccattcaggctgattttcttcctccatcaagctgaaagagtctcatataaagac 320

                                                                       
Query: 121 attgtcagtttgagataaatatttgaagatgtactggcctacggaaaatttcctgactat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attgtcagtttgagataaatatttgaagatgtactggcctacggaaaatttcctgactat 380

                                                                       
Query: 181 ttagtctgcaattttattcatagctaggaagtttacagaatagctcatgttactctgaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttagtctgcaattttattcatagctaggaagtttacagaatagctcatgttactctgaag 440

                                                                       
Query: 241 aa-----ttttttgtgaagtagtcagtatttcatttctactctggcatgtaaagcagtga 295
           ||     |     |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaagcat-----gtgaagtagtcagtatttcatttctactctggcatgtaaagcagtga 495

                                                                       
Query: 296 agagtatttgctcatatctcatttcacaccctacaccacaaaaaa--agaacacggaatc 353
           |||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||
Sbjct: 496 agagtatttgctcatatctcatttcacaccctacaccacaaaaaacaagaacatggaatc 555

                                                                       
Query: 354 taagtgggagagtcaggtttgccacagtgacaaagtaacagaaagaagcaagctaaaagg 413
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 556 taagtgggagagtcaggtttgccacagtgacaaagtaacaaaaagaagcaagctaaaagg 615

                                                                       
Query: 414 aaaacatgtttgatttgcctcatgcacttagagatttcagcccaaggttacttgtctagt 473
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aaaacatgtttgatttgcctcatgcacttagagatttcagcccaaggttacttgtctagt 675

                                                           
Query: 474 cttgggtgctctggggcctgtggttattattgaatcagtataagcacg 521
           |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 676 cttgggtgctctggggcctgtggttattattgaatcggtataagcacg 723


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 923
Length adjustment: 10
Effective length of query: 511
Effective length of database: 913
Effective search space:   466543
Effective search space used:   466543
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)