CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCACAACTGGCAATGTTAAAGGACAAACTGAAAAAGAAAAGGACTAAAT
AAGGGTTGAAATCTAAAACCAGGTGAACTGACCAGCCCGTTCCAGCAACA
GTGGACAGACTTGAATGGATACATCAAGTGGACAGGTTTGTATGTTCTCA
GCTATGCTGGACTCTGCAAAAAACAAACAAACAAACAAACAAACTTACAA
ACAAACAAACAAACAAAGATCTAAGTTCGGAGGCTGAATTATTAGATAGA
GCCCTTACTTTACTACTGTGGTAACATGAGTTTTAGGTTTTAAAACAAAG
GACAAGGGCAAAAACAAGATAGACAACAACAATATAAAAAACATATATCT
TAAAATATCCATTACTTTACACAGAAACCAACATCTCTTTAAATCCAAAT
TTCTCAAAAGAATATATTGATGTCATCATTCACTCAACTCCAGAAGCCAC
TGTTAAGCAGACAGCTCTGGACCATGTCTGGAACTGAGATGGGGACGCCT
CATTGTTCTTCCAGCTTCCCTGGTGACCTCACCATGCACCTAGGCAGCTT
CCTGCTTCAGCCTGCTCCTCCATGTCTGCTCCTCCATCTCTGGGAACTTG
TTCCTTCTCTCTCTTGCAGGACTGCTCTGCCTGTAATTTGCATGCAAAGT
TCCACAATGGGTCTN

GAATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGAGCCCCATCT
TTTAAGGGGGTTATATGATTTTCTGGAGTCCACCCTCTTGAGTTCTTTAT
ATATATTGGATATTAGTCCCCTATCTGATTTAGGATGGGTAAAGATCCTT
TCCCAATCTGTTTGTGGCCTTTTTGTCTTATTGACTGTGTCTTTTGCCTT
ATAGAAGCTTTGCAGTTTCATAAGGTCCCATTTGTCAATCCTCGATCTTA
CAGCACAAGCCATTGCTCTTCTGTTCAGGAATATTTCGCCTGTGCCCATA
TCTTCGAGGCTTTTCCCCACTTTCTCCTCTATAAGTTTCAGTTTCTCTGG
TTTTATGTGAAGTTCCTTGATACACTTAGATTTGACCTTAGTACAAGGAG
ATAAGAATGGATCGATTCGCATTCTTCTACATGATAACAACCAGTTGTGC
CAGCTCCATTTGTTGACAATGCTATCTTTCTGGATGACTTTAGCTCCCTT
GGCGAAGATTAAGTGACCATAGGTGTGTGGGTTCCTTTTTGGGGTCTTGC
TTTCGCTTCCCGTGGACCTTTTGTTTGTTCTTTCTCTAGTAATCTGGTTT
GTTTTTAACTCTGGTGGTTCCCGTGTTAACTTTTTAGTTCTACTCCTCTA
TTTTTCTCCCCCATGTTTTTCCTCCCCTT

Query= MSMg01no445_j12.b1 MSMg01no445_j12.b1 CHROMAT_FILE:
MSMg01no445_j12.b1 PHD_FILE: MSMg01no445_j12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:51 2005
         (568 letters)



>mm_chr3_133856800_133857772
          Length = 973

 Score =  917 bits (474), Expect = 0.0
 Identities = 539/564 (95%), Gaps = 13/564 (2%)
 Strand = Plus / Minus

                                                                       
Query: 12  actgaaaaagaaaaggactaaataagggttgaaatctaaaaccaggtgaactgaccagcc 71
           ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 actgaaaaaaaaaaggtctaaataagggttgaaatctaaaaccaggtgaactgaccagcc 901

                                                                       
Query: 72  cgttccagcaacagtggacagacttgaatggatacatcaagtggacaggtttgtatgttc 131
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 900 cgttccagcaacagtggacaggcttgaatggatacatcaagtggacaggtttgtatgttc 841

                                                                       
Query: 132 tcagctatgctggactctgcaaaaaacaaacaaacaaacaaacaaacttacaaacaaaca 191
           |||||||||||||||||| ||| ||||||||||||||||||||||||    |||||||||
Sbjct: 840 tcagctatgctggactctccaacaaacaaacaaacaaacaaacaaac----aaacaaaca 785

                                                                       
Query: 192 aacaaacaaagatctaagttc-ggaggctgaattattagatagagcccttactttactac 250
           |||||||||| |||||||||| || |||||||||||||||  ||||||||||||||| ||
Sbjct: 784 aacaaacaaaaatctaagttcagg-ggctgaattattagaccgagcccttactttaccac 726

                                                                       
Query: 251 tgtggtaacat---gagttttaggttttaaaacaaaggacaagggcaaaaacaagataga 307
           |||||||||||   ||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 725 tgtggtaacattatgagttttagattttaaaacaaaggataagggcaaaaacaagataga 666

                                                                       
Query: 308 caacaacaatataaaaaacatatatcttaaaatatccattactttacacagaaaccaaca 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 caacaacaatataaaaaacatatatcttaaaatatccattactttacacagaaaccaaca 606

                                                                       
Query: 368 tctctttaaatccaaatttctcaaaagaatatattgatgtcatcattcactcaa-ctcca 426
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 605 tctctttaaatccaaatttctcaaaagaatatattgatgtcatcattcactcaaac-cca 547

                                                                       
Query: 427 gaag-ccactgttaagcagacagctctggaccatgtctggaactgagatggggacgcctc 485
           | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ggagtccactgttaagcagacagctctggaccatgtctggaactgagatggggacgcctc 487

                                                                       
Query: 486 attgttcttccagcttccc-tggtgacctcaccatgcacctaggcagcttcctgcttcag 544
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 attgttcttccagcttcccctggtgacctcaccatgcacctaggcagcttcctgcttcag 427

                                   
Query: 545 cctgctcctccatgtctgctcctc 568
           ||||||||||||||||||||||||
Sbjct: 426 cctgctcctccatgtctgctcctc 403


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 973
Length adjustment: 10
Effective length of query: 558
Effective length of database: 963
Effective search space:   537354
Effective search space used:   537354
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)