Query= MSMg01no445_k01.b1 MSMg01no445_k01.b1 CHROMAT_FILE:
MSMg01no445_k01.b1 PHD_FILE: MSMg01no445_k01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:54 2005
(239 letters)
>mm_chr3_108853167_108853801
Length = 635
Score = 410 bits (212), Expect = e-119
Identities = 230/238 (96%), Gaps = 6/238 (2%)
Strand = Plus / Minus
Query: 1 ggggaatacatttttgtgcaat-cccacaataacctctgcccaccacgttttgctttctt 59
||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||
Sbjct: 433 ggggaatacatttttgtgc-atccccacaataacctctgcccaccactttttgctttctt 375
Query: 60 atcatgaggcctcaatttaaacatcacccgatcatgtcccattcttactcagacaaacta 119
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 374 atcatgaggcctcaatttaaacatcacccgatcatgtcccattcttact----caaacta 319
Query: 120 gttttcatttacagcatttatccatcatgagttatgcttgtgtgattactaatttatgct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gttttcatttacagcatttatccatcatgagttatgcttgtgtgattactaatttatgct 259
Query: 180 cacctagccaaagaatagtcaactatttgccaaagcagttctgttttcttcctgggca 237
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 258 cacctagccaaagaatagtcaactatttgccaaagcagttctgttttcctcctgggca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 635
Length adjustment: 9
Effective length of query: 230
Effective length of database: 626
Effective search space: 143980
Effective search space used: 143980
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no445_k01.g1 MSMg01no445_k01.g1 CHROMAT_FILE:
MSMg01no445_k01.g1 PHD_FILE: MSMg01no445_k01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:54 2005
(176 letters)
>mm_chr3_108688655_108689230
Length = 576
Score = 310 bits (160), Expect = 4e-89
Identities = 163/164 (99%)
Strand = Plus / Plus
Query: 13 tctcagaaataactaagctgcaaaaaatgaacaaagtctccactgttcattggccagata 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 tctcagaaataactaagctgcaaaaaatgaacaaagtctccactgttcattggccagata 272
Query: 73 cttctggaacatcatccaagagtatcttgtcacagaaagaaaatcatgctgatcatatat 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cttctggaacatcatccaagagtatcttgtcacagaaagaaaatcatgctgatcatatat 332
Query: 133 gctggggaaacctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 176
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 cctggggaaacctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 376
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 176
Length of database: 576
Length adjustment: 8
Effective length of query: 168
Effective length of database: 568
Effective search space: 95424
Effective search space used: 95424
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
