Query= MSMg01no445_m15.b1 MSMg01no445_m15.b1 CHROMAT_FILE:
MSMg01no445_m15.b1 PHD_FILE: MSMg01no445_m15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:07 2005
(662 letters)
>mm_chr3_155725397_155726458
Length = 1062
Score = 1141 bits (590), Expect = 0.0
Identities = 643/664 (96%), Gaps = 8/664 (1%)
Strand = Plus / Minus
Query: 5 gaattcacctagtatcttgcttttctttgtagcttcttttactgtttgattcattcacgg 64
|||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 862 gaattcacctagaattttgcttttctttgtagcgtcttttactgtttgattcattcacgg 803
Query: 65 tccttccttgtctttgggtagctttctttctcattctctggatatactcccacagtgaac 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tccttccttgtctttgggtagctttctttctcattctctggatatactcccacagtgaat 743
Query: 125 gatgattcaggtactcctaaccttcgacaattgagttaaaatgaagccacttcaagatgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gatgattcaggtactcctaaccttcgacaattgagttaaaatgaagccacttcaagatgt 683
Query: 185 gtgctcctcaggtatggaagatgaaacctccttggatttgttgtaaggatagcgtttttc 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ctgctcctcaggtatggaagatgaaacctccttggatttgttgtaaggatagcgtttttc 623
Query: 245 agtaaattaattaaatttaattaagtacttagctgtgtttgtgttagactcccctgaaca 304
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 622 agtaaattaattaaatttaattaagtaccaagctgtgtttgtgttagactcccctgaaca 563
Query: 305 acaaatgggaaggcctgctgccattatgtagtggtgtcctgttccagaactaccctttca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 562 acaaatgggaaggcctgctgccattatgtagtggtgtcctgttccagaactacactttca 503
Query: 365 ggaagtgtacagtactgattccctggagtttaatgtagattttcctagcacatcctttcc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ggaagtgtacagtactgattccctggagtttaatgtagattttcctagcacatcctttcc 443
Query: 425 taatgcaactttttgtttctgcccacttacagtctgtgtatatttttagctgagtagtca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 taatgcaactttttgtttctgcccacttacagtctgtgtatatttttagctgagtagtca 383
Query: 485 gcttggttctttagcccatgtttgaattaaattgttcattgtcttcatatggagttttaa 544
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gcttggctctttagcccatgtttgaattaaattgttcattgtcttcatatggagttttaa 323
Query: 545 ggaggcactgtatattttaaacaatagcctttactcttttaagctctgcatttatttttt 604
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 322 ggaggcactgtatattttaaacaatagcctttactcttttaagctctgcacatatttttt 263
Query: 605 tttc-----aaaaaaatcttcagttgtttgttcattttttat-ttttagttgacaaggtt 658
|||| |||||||| |||||||||||||||||||||| |||||||||| ||||||
Sbjct: 262 tttccaaaaaaaaaaat--tcagttgtttgttcattttttaaattttagttgataaggtt 205
Query: 659 attt 662
||||
Sbjct: 204 attt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no445_m15.g1 MSMg01no445_m15.g1 CHROMAT_FILE:
MSMg01no445_m15.g1 PHD_FILE: MSMg01no445_m15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:07 2005
(464 letters)
>mm_chr3_155663859_155664722
Length = 864
Score = 890 bits (460), Expect = 0.0
Identities = 463/464 (99%)
Strand = Plus / Plus
Query: 1 tgcttccatttgtctttaattaaggacccagagtaatgcagcaaccactgtctgatatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 tgcttccatttgtctttaattaaggacccagagtaatgcagcaaccactgtctgaaatat 260
Query: 61 cgcagatcataatttcaggtagaagggcatttggggaggtttacaccaacaaccaaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgcagatcataatttcaggtagaagggcatttggggaggtttacaccaacaaccaaatat 320
Query: 121 ttgacacaaatactgcacaggtatcagctatctcaaattgatctaaattattcatatagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgacacaaatactgcacaggtatcagctatctcaaattgatctaaattattcatatagc 380
Query: 181 aacacccaaaccaagagatcctgaaagtttacaaataaatattgaggaatattaatgagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacacccaaaccaagagatcctgaaagtttacaaataaatattgaggaatattaatgagt 440
Query: 241 tctgtagttactgggtgcatgaacatttgtggtcactcctatgtctgagtgaaaaatata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgtagttactgggtgcatgaacatttgtggtcactcctatgtctgagtgaaaaatata 500
Query: 301 agggagagaaaaccagggtgaagatttaggcatttgaaactcaaccatctacctctgctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agggagagaaaaccagggtgaagatttaggcatttgaaactcaaccatctacctctgctt 560
Query: 361 catcctttgtgacaaaaagagtgagtcagataataagatattacatgaattttcccaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catcctttgtgacaaaaagagtgagtcagataataagatattacatgaattttcccaata 620
Query: 421 cacctaacattgataaacttagagtacattaattaatattgaat 464
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cacctaacattgataaacttagagtacattaattaatattgaat 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
