Query= MSMg01no447_e21.b1 MSMg01no447_e21.b1 CHROMAT_FILE:
MSMg01no447_e21.b1 PHD_FILE: MSMg01no447_e21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:09 2005
(494 letters)
>mm_chr3_120601875_120602768
Length = 894
Score = 820 bits (424), Expect = 0.0
Identities = 440/448 (98%), Gaps = 6/448 (1%)
Strand = Plus / Minus
Query: 7 gaattcttgcct---attatccataccagatccgggatgtttatatacatacacacatac 63
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaattcttgcctaacatta---ataccagatccgggatgtttatatacatacacacatac 389
Query: 64 atacatatgtagtattatatatatgatatataataatctccagtgcgtactcaccactca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 atacatatgtagtattatatatatgatatataataatctccagtgcgtactcaccactca 329
Query: 124 tgtgtctgacatcatactaagtggtttatatgtctgagtaggtgggcttcttacatagta 183
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 328 tgtgtctgacatcatactaagtggtttatatgtctgaggaggtgggcttcttacatagta 269
Query: 184 gactttcagagcaagaaggggcctctgagtcaaagagtgctcattctttcatttgacaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gactttcagagcaagaaggggcctctgagtcaaagagtgctcattctttcatttgacaaa 209
Query: 244 gcagcgagctgaagctgtgacgactgggcggcatgcccaagatctcagggcatcgagttg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gcagcgagctgaagctgtgacgactgggcggcatgcccaagatctcagggcatcgagttg 149
Query: 304 tcacccacatgctggcagcctgataaggctgacaggaatccaggtggacactatgaaatt 363
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 148 tcacccacatgctggcagcctgataaggctgacaggaatccaagtggacactatgaaatt 89
Query: 364 actcaagcccctcaatcttcttcagctattgagaaaaacaagtaatttctatgcctgtgc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 actcaagcccctcaatcttcttcagctattgagaaaaacaagtaatttctatgcctgtgc 29
Query: 424 ctttgcctggccattgaacagccctgta 451
||||||||||||||||||||||||||||
Sbjct: 28 ctttgcctggccattgaacagccctgta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_e21.g1 MSMg01no447_e21.g1 CHROMAT_FILE:
MSMg01no447_e21.g1 PHD_FILE: MSMg01no447_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:09 2005
(381 letters)
>mm_chr3_120403101_120403886
Length = 786
Score = 518 bits (268), Expect = e-151
Identities = 365/426 (85%), Gaps = 45/426 (10%)
Strand = Plus / Plus
Query: 1 ctggaagacagaaccaagtgaacagaggaaagaaacgctggaaactaacatcggtgagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggaagacagaaccaagtgaacagaggaaagaaacgctggaaactaacatcggtgagaa 260
Query: 61 caccgcaggtctattctgagaccaagtttccatacaggtggttttccatgggaagaagaa 120
|||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 261 caccgcaggtatattctgagaccaagtttccatacaggaggttttccatgggaagaggaa 320
Query: 121 tgcagtgatgcaagagccaagtgaatgaccgagggacgtctccaggacttcttgtcttag 180
|||||||||||||||||||||||||| |||| | |||||||||||||||||||||||
Sbjct: 321 cacagtgatgcaagagccaagtgaatgatggaggtatgtctccaggacttcttgtcttag 380
Query: 181 attatggagtagcatcatcaaatctgtatttttaattaactggaattcacagcagaagga 240
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 attatggagtagcataatcaaatctttatttttaattaactggaattcacagcagaagga 440
Query: 241 actgcatatagcaaagaacccatgagcccat-----tcattcagctagacctccccacct 295
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 441 actgcatatagcaaagaacccatgaccccatgatattcattcagctagacctccccacct 500
Query: 296 ct------------------------gtgtgtgtgtgtgtgtgtgtgtgtgtat------ 325
|| ||||||||||||||||||||||||||||
Sbjct: 501 ctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgt 560
Query: 326 ----------aanccagaagatatggntatctctatttctatctactttagtcccttaag 375
|| ||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 gtgtgtgtgtaagccagaggatatgcctatctctatttctatctactttagtcccttaag 620
Query: 376 ctaaga 381
||||||
Sbjct: 621 ctaaga 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 786
Length adjustment: 9
Effective length of query: 372
Effective length of database: 777
Effective search space: 289044
Effective search space used: 289044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
