TCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACTTAGGTCTGCCGCGAATTATAGGAACTAGGAACTGATAGACGG
TTGTCCGCAGCTTTTAAAAGCTGTCTCAGGCGAGAAGAAAAGGGTTTAAA
AAGAACATGAATCAGGCGATTGTCCACAGTTTTCACAAGTTGCTTCAGGC
AAGAGGAGTAGAGCTTGAAGTACAATTGTTAGAAAAAATTTTAGATAGGA
TAGATTCTTGTTGCCCATGGTTCAAAGAAGAAGAAACTTTAGATATCAGA
ACCTAGGAGAAAATTGGAAAAGTCTTGAAAATCACTCCGGCAGATAATTT
CACTCTTTGCCTCTGGGCACTCATAAAAGATGCTATTGGAAAGGTGATCT
CGCAGGGGTCAGATAGTACCCAGGCAGAGCTTGATGAATCTCAGGAAGAG
CGAAGAGCGCCTGTCAGAGAGGGTCTTCTCAGAAAAGGGGCCTCTCTACT
CTAAATTGATTGATATAGAGGCTCTGATGTTGAGCTTCTTTTTTGCTTAT
GATTACTCCTAAAGGAAGCAGGGCTAATCTTTTGCGAAAATTATGGGCCC
CTTTCCCAGGGCTCCCGGTTCCAAATTAAAGTCTCCCCCGGGGGGAAAAG
TGCTTTTCCAAGTGGTATCGGGCATTTTTATCATCCCATACCCGCGCAGA
GAAGGGGCGTGTGTATATTCGGGTCCGCCGTGC

CAAAAAACACCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGGGCATGTTACC
AAGAGTGGTATAGCTGGATATTGAGGAACCACCACATTGATTTCTACAGT
GGCTGTACAAGATTTATTTAACACCTTAGGAATACTAAAATATTATGGGA
ATTAATTAAGTTTGTAGACTTTTTTGACAAAATTGCCCTTGAAAATGGGG
AAAGAATAGTGATGTTTAACATAATATCAGTAAGAGTCTCATAGGAAAGA
TTTGGTGAGGGGATTGAAACTTATTTATTCTAATGGTACTTGAATGAATG
AATAGGATATAATGGCATGATACTTTAAAAAATATGATACTGTCTCTAAT
GTACTTTAGAATTGAAATTCAGTACACACACACACACACACAATGGTATG
AATTTTAGTAACCTTAGTAAAGCAACATTTACTCCAGACAACTGAGATAA
AACCCCATAGCTTTGTCATTCGAATTAACGCGCCTGCCATATGTCCCTTA
TTATTATTGCAGTACCTGCAATGAATTACGCCCCCCCTTGCCTTTTTTAT
CTTCGTCCTTCCATGTATTCCTTGTTGTTCCTCACATGCTATTCTTACTA
ATCCCCTTTTTTTCCCTATTTTCTCATGTCCTAAACTCTACTCGCTTTGT
CTTACCATTATAATCTCTCCACCCTTTTCAAAAC

Query= MSMg01no448_a06.g1 MSMg01no448_a06.g1 CHROMAT_FILE:
MSMg01no448_a06.g1 PHD_FILE: MSMg01no448_a06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:07 2005
         (375 letters)



>mm_chr3_3778120_3778896
          Length = 777

 Score =  694 bits (359), Expect = 0.0
 Identities = 372/377 (98%), Gaps = 2/377 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgggcatgttaccaagagtggtatagctggatattgaggaaccaccacattgatttct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgggcatgttaccaagagtggtatagctggatattgaggaaccaccacattgatttct 260

                                                                       
Query: 61  acagtggctgtacaagatttatttaacaccttaggaatactaaaatattatgggaattaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagtggctgtacaagatttatttaacaccttaggaatactaaaatattatgggaattaa 320

                                                                       
Query: 121 ttaagtttgtagacttttttgacaaaattgcccttgaaaatggggaaagaatagtgatgt 180
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaagtttgtagactttttcgacaaaattgcccttgaaaatggggaaagaatagtgatgt 380

                                                                       
Query: 181 ttaacataatatcagtaagagtctcataggaaagatttggtgaggggattgaaacttatt 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 ttaacataatatcagtaagagtctcataggaaagatttggtgaggggattgaaacttaat 440

                                                                       
Query: 241 tattctaatggtacttgaatgaatgaataggatataatggcatgatactttaaaaaatat 300
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatcctaatggtacttgaatgaatgaataggatataatggcatgatactttaaaaaatat 500

                                                                       
Query: 301 gatactgtctctaatgtactttagaattgaaattcagtacacacacacacacacaca--a 358
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 501 gatactgtctctaatgtactttagaattgaaattcagtacacacacacacacacacacaa 560

                            
Query: 359 tggtatgaattttagta 375
           |||||||||||||||||
Sbjct: 561 tggtatgaattttagta 577


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 777
Length adjustment: 9
Effective length of query: 366
Effective length of database: 768
Effective search space:   281088
Effective search space used:   281088
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)