Query= MSMg01no448_h13.b1 MSMg01no448_h13.b1 CHROMAT_FILE:
MSMg01no448_h13.b1 PHD_FILE: MSMg01no448_h13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:45 2005
(517 letters)
>mm_chr3_58059704_58060623
Length = 920
Score = 864 bits (447), Expect = 0.0
Identities = 491/507 (96%), Gaps = 3/507 (0%)
Strand = Plus / Minus
Query: 14 gaattccaggtcaagttctgctccccactctgttcttgggcactatacaacaacttaatg 73
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gaattccaggtcaagcactgctccccactctgttcttgggcactatacaacaacttaatg 661
Query: 74 tgtactgagatagttctttctcagacactggggccatttaaatggtctattctgaagctt 133
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tgtactgagatagctctttctcagacactggggccatttaaatggtctattctgaagctt 601
Query: 134 ttctgagagtactcttcctctgtcctttcatgagtgacctggcatcttattctcccttcg 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ttctgagagtactcttcctctgtcctttcatgagtgacctggcatcttattctcccttcg 541
Query: 194 gttgatagggcctgtccctcgtggtaatgggtcggtcttttctacgaagttgagtgcttc 253
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 540 gttgacagggcctgtccctcgtggtaatgggtcggtcctttctacgaagttgagtgcttc 481
Query: 254 caacttacagctgggataagcaagtgaagaatccatacaaaaaccaaagactcaagttct 313
||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct: 480 caacttagagctgggataagcgagtgaggaatccagacaaaaaccaaagactcaagttct 421
Query: 314 cctaaaacaaaacacaaaacaaacaataccaaaaacctaaaacaacaacaa---taaaaa 370
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 420 cctaaaacaaaacacaaaacaaacaataccaaaaacctaaaacaacaacaacaataaaaa 361
Query: 371 aaaagtacttaaaaaatatatgacaaataaagcaactcaacaaattttcaaataaataca 430
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aatagtacttaaaaaatatatgacaaataaagcaactcaacaaattttcaaataaataca 301
Query: 431 tttttaaaaatgtattttttccaaagctttcctattttctaacaatttattatagaacct 490
||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||
Sbjct: 300 tttttaaaaatgtattttttccacagctttcctattttctaccaatatattatagaacct 241
Query: 491 ttgcaaagaacactgggtgatcaaggg 517
|||||||||||||||||||||||||||
Sbjct: 240 ttgcaaagaacactgggtgatcaaggg 214
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 920
Length adjustment: 10
Effective length of query: 507
Effective length of database: 910
Effective search space: 461370
Effective search space used: 461370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_h13.g1 MSMg01no448_h13.g1 CHROMAT_FILE:
MSMg01no448_h13.g1 PHD_FILE: MSMg01no448_h13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:46 2005
(463 letters)
>mm_chr3_57937156_57938018
Length = 863
Score = 849 bits (439), Expect = 0.0
Identities = 457/463 (98%)
Strand = Plus / Plus
Query: 1 attcttcatgttggagaaggcgcatgtggctgtcgttgagagaccctgctgatccctgct 60
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 attcttcatgctggagaaggcgcatgtggctgtcgttgagagaccctgctaatccctgct 260
Query: 61 ctgtgaattttgatgctaaggcatcagacatgtaggtgaagctgccttggtccagcctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtgaattttgatgctaaggcatcagacatgtaggtgaagctgccttggtccagcctat 320
Query: 121 ctacttgctgagcatcactcagtgacttgcaccaatttagagagaagaaaaagtgtccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctacttgctgagcatcactcagtgacttgcaccaatttagagagaagaaaaagtgtccag 380
Query: 181 ctgagatcaactacctgagatcccaaccactaagtcaggagactgaatggctattgcttt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 ctgagatcaactacctgagatcccaaccactaagtcaggagactgaatggctgttgcttt 440
Query: 241 aagtcctatttttttagagtgattagtaatagactaccagaataggctccagccataccc 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagtcctaaatttttagagtgattagtaatagactaccagaataggctccagccataccc 500
Query: 301 aaatgaaacaaccccaactctcagtgactttatgcctcttcctagaattctttctcacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaatgaaacaaccccaactctcagtgactttatgcctcttcctagaattctttctcacaa 560
Query: 361 tattagctttacaaaaaaagtaaaaggagaaagaatgtttgactgaaaacaggccagaca 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cattagctttacaaaaaaagtaaaaggagaaagaatgtttgactgaaaacaggccagaca 620
Query: 421 ccccaccccaccccaccccccagctcccagggactggaccacc 463
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccccaccccaccccaccccccagctcccagggactggaccacc 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
