AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGCGGAATT
CTAGAAGGTCTTTGCATTATAGAGTCTTATAGAAAATACTCTATAGAGTA
TTCTATAGTCTTTGTTTATTCCGATCTACATTCATTTATTTTTAATTCAG
TAAAGAGTTTCAATTAATTGGTAAGCTTTCTGTTGCTTCAGTTGTTGATA
TACAGTTTTATCCATGGTGGTCAGATAGGATACAGTGAGTTATTTAACTT
TTCTTATATTTGTTGAGAACTGCTTTGTGTCTGATTATGTGGTCAATTTT
GGAGAAGGTTTATTGATGTATTTATAAGAAAGCATATTCTTTTTTTTTTT
TTGAGAAATGTTCTGTGACTATCTGTAAGGACCATTTGGTTTATATTTGT
CTGTTAACTTCAATATTTTTTTTCTGTTTAGACTTTGCCTATAGATCTGT
CCTTTGCTGACAATGAAGCCTTCCTCTATCAGTATGGCAAGGCCAATTGT
GCGCTTCTCCTCGCCGTCGCGGCTCATTTTATAATGTCGCGATCCGCCTT
GCCGGACGTTCCCCTGGTTTTATATTGAGACGTTATGCTATACCGCATGT
TTTCCCTGTAGCCTCCCTATATTACAAATGTTGATCCCGGTCGCTTGTTT
TTTTTTGCTTACCATTTTTATCTTTGGCCACATCGTGATTTTTACACTTT
TTTTCCCACATATTTTTATTTCCACTTCCCCGACACTTTCACGTAAATTC
TTTGTTTTTCCTGTTACCCCCCTG

AAAACGCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATATTTCATCATGTTACAG
TCTTAATTTATGTTCATAGCTTCTGGTATTTAATATATACACTATTTCTA
ACAGTAATAAGAAGTCCATTTATAACTGTGAACTTTTAAATTATGTTATA
TTGCCACTTAAATTAGTCTAGAACTGTTTTCTTATATTTATGTCCAGAAT
TTTATAAGGAAAGATAAACCAACTTTAATGCTGACATTTTAAAAGTAGTG
TAATTTCTCAGACTTGTAAAATTTTTTATTTATTAAGGTAAGACTACCAG
CTGAAAGACTAATTGTCTCATGCCTGTAAATTTAATCTTATAATTTAACT
ATTTTCTCAATATATACAAAACAGAAAGAATTAGAATTTCAAAGCTAGAC
TAAAATACATAAGTGTTACAGTAAGTGGGCAATTAACCTGCAAACTGACT
TGTGTCTGTTTTAAATGTGACTAACCATGGACATAGTCCCCAACTCTGGA
AGGAGGCCCTTTTTGTTACTCAGCACAGGGGCCAAACATCTGTTAGCAAC
TTTTCATTATCTATTCGCATTTGTGTGATAATCTTTCCACTAAGAAAACT
AACATAGTGATTCCTACCTTTTGTTTATTAAATTCTCTTAGAGGCAATTT
ACCCCCCTCATTTACTTTATTTTTAACTAAAAAAATTAG

Query= MSMg01no448_i04.g1 MSMg01no448_i04.g1 CHROMAT_FILE:
MSMg01no448_i04.g1 PHD_FILE: MSMg01no448_i04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:48 2005
         (539 letters)



>mm_chr3_76971824_76972762
          Length = 939

 Score =  965 bits (499), Expect = 0.0
 Identities = 529/539 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   catatttcatcatgttacagtcttaatttatgttcatagcttctggtatttaatatatac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 catatttcatcatgttacagtcttaatttatgttcatagcttctggtatttaatatatac 680

                                                                       
Query: 61  actatttctaacagtaataagaagtccatttataactgtgaacttttaaattatgttata 120
           ||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||
Sbjct: 679 actatttctaacagtaataagaagtccatttataactgtaaactttttaatcatgttata 620

                                                                       
Query: 121 ttgccacttaaattagtctagaactgttttcttatatttatgtccagaattttataagga 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 619 ttgccacttaaattagtctagaactgttttcttatatttatgtccagaattttaaaagga 560

                                                                       
Query: 181 aagataaaccaactttaatgctgacattttaaaagtagtgtaatttctcagacttgtaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 559 aagataaaccaactttaatgctgacattttaaaagtagtgtaatttctcggacttgtaaa 500

                                                                       
Query: 241 attttttatttattaaggtaagactaccagctgaaagactaattgtctcatgcctgtaaa 300
           |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 attaattatttattaaggtaagactaccagctgaaagactaattgtctcatgcctgtaaa 440

                                                                       
Query: 301 tttaatcttataatttaactattttctcaatatatacaaaacagaaagaattagaatttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tttaatcttataatttaactattttctcaatatatacaaaacagaaagaattagaatttc 380

                                                                       
Query: 361 aaagctagactaaaatacataagtgttacagtaagtgggcaattaacctgcaaactgact 420
           |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 379 aaagcttgactaaaatacataagtgttacagtaagtgggcaattagcctgcaaactgact 320

                                                                       
Query: 421 tgtgtctgttttaaatgtgactaaccatggacatagtccccaactctggaaggaggccct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tgtgtctgttttaaatgtgactaaccatggacatagtccccaactctggaaggaggccct 260

                                                                      
Query: 481 ttttgttactcagcacaggggccaaacatctgttagcaacttttcattatctattcgca 539
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 259 ttttgttactcagcacaggggccaaacatctgttagcaacctttcattatctattcgca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space:   491441
Effective search space used:   491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)