Query= MSMg01no450_e13.b1 MSMg01no450_e13.b1 CHROMAT_FILE:
MSMg01no450_e13.b1 PHD_FILE: MSMg01no450_e13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:09 2005
(545 letters)
>mm_chr3_97664484_97665434
Length = 951
Score = 959 bits (496), Expect = 0.0
Identities = 535/552 (96%), Gaps = 8/552 (1%)
Strand = Plus / Minus
Query: 1 gtgcgagcaattaattttctgtattttgagaaggaaaatctctgccttggcaaccatgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 gtgcgagcaattaattttctgtattttgagaaggaaaatctctgccttggcaaccatgct 692
Query: 61 ctgcacttggctgcagcttggggactttgtctcagtcactgcttccctgccttagtccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ctgcacttggctgcagcttggggactttgtctcagtcactgcttccctgccttagtccca 632
Query: 121 caaactagatcagggtatactgctggcccccacgcctttcaacaaaggctgggtaaggaa 180
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 631 caaactagatcagggtacactgctggcccccacgcctttcaacaaaggctgggtgaggaa 572
Query: 181 gactgggaaggttgcttttgcttggaagcaggacttgagtccttttcaccccagcatcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gactgggaaggttgcttttgcttggaagcaggacttgagtccttttcaccccagcatcct 512
Query: 241 cttctttctggaagctcatttcattgtggttgtgttgagcactcactcagtggatgcctt 300
| || | |||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 511 cctcatcctggaagctcatttcactgtggttgtgttgaacactcactcagtggatgcctt 452
Query: 301 aagacaccacccgcacggaaatccatctgtcttataaataagattcccaactgggctcag 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aagacaccacccgcatggaaatccatctgtcttataaataagattcccaactgggctcag 392
Query: 361 gacatttcacgtgttgtctcgggcaaaaattcaaataacatttaaagttagaataaaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gacatttcacgtgttgtctcgggcaaaaattcaaataacatttaaagttagaataaaagt 332
Query: 421 ccaaaataaaaaaaatagatg-------tcatgatgacctagggtggctccatccaatcc 473
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 331 ccaaaat-aaaaaaatagatgtcatgattcatgatgacctagggtggctccatccaatcc 273
Query: 474 tattttaaaacattcagacacacggggccatgttccctttgcctcatagcatcttctgag 533
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 272 tattttaaaacattcagacacacggggccatgttgcctttgcctcatagcatcttctgag 213
Query: 534 ctctctagtcag 545
||||||||||||
Sbjct: 212 ctctctagtcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 951
Length adjustment: 10
Effective length of query: 535
Effective length of database: 941
Effective search space: 503435
Effective search space used: 503435
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no450_e13.g1 MSMg01no450_e13.g1 CHROMAT_FILE:
MSMg01no450_e13.g1 PHD_FILE: MSMg01no450_e13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:09 2005
(416 letters)
>mm_chr3_97604182_97604998
Length = 817
Score = 752 bits (389), Expect = 0.0
Identities = 410/417 (98%), Gaps = 1/417 (0%)
Strand = Plus / Plus
Query: 1 ctgttattcgtggtgtgacatttgagagacatcccaaagctttgtaaatatttgattcct 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 ctgttattcgtggtgtgacatttgagagacatcccaaagctttgtaaacatttgattcct 260
Query: 61 tcagattgtgacctttctcttaacaatgccacctgctctccctgtgacctctgtggtgtg 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 tcagattgtgacctttctcttaacaatgccacctactctccctgtgacctctgtggtgtg 320
Query: 121 agacatccaggcagctggactcatgtgcataacattaagtttctagactttatcaggata 180
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 321 agacatccaggcagctggactcatgtgcacaacattaagtttctagactttaacaggata 380
Query: 181 gaagacttggtttatgaagtacaactcctgccttcccacagagtctatgctcaccatctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagacttggtttatgaagtacaactcctgccttcccacagagtctatgctcaccatctt 440
Query: 241 cagttgtatactaaggccccaatgaggcacagaggttgttccaacatgggacaagtgtcc 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cggttgtatactaaggccccaatgaggcacagaggttgttccaacatgggacaagtgtcc 500
Query: 301 cttctttgccagggaaggaacaacagtgcactgtcttcaggcacagtcagaccgtgcaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttctttgccagggaaggaacaacagtgcactgtcttcaggcacagtcagaccgtgcaat 560
Query: 361 acaagg-tggtgcccgccagagccagcttgagtatccagtctcccaaggagatggaa 416
|| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 accagggtggtgcccgccagagccagcttgagtatccagtctcccaaggagatggaa 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 817
Length adjustment: 9
Effective length of query: 407
Effective length of database: 808
Effective search space: 328856
Effective search space used: 328856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
