TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTCCTCTCTTCCTCTTGCATCTTGTCTCCTTGCCTCTAGGGACATGGAA
GTCCTTCCTGTTCTTTCTAACCAGCAATTGGCCCATGGCTTTTTTACTGA
CAGATCAAGAGCCAATTGGGGAACAATACTGTAGCATCAGAACCACTCCT
ACCGACCATTACTAATCCCCATGACCCCAAATAGTCACTGATTCACTATG
TCTTCCTTACTGTCCCAAGTCTATGTCATAGTATTTTCCTTCACATTATT
TCCACTTCCCACTCTCCCTCTTTTTCCTCCTCCTCCTCCTCTTCCTCCTT
CTCTTTTTCCTTTTTTTCTTCTTCTTCCACCCCTCTCACATCATGCATAA
CCAGTACTGTTCACATACTCTTTAATGCCTGGTCTTCTACTGAATTCTTT
TTTTTTTTAACATGTATTTATTTATTTATTTATTTATTTATTTATTTATT
TATTTATTTATTTATTTAATGTATGTGAATACACTGTCACTCTCTTCAGA
CACACTAGAAGAAGGCATCAGATACCTTTACAGATAGGTGTGAGCCACCA
TGTGGTTGCTTGGAATTGAACTCAGGACCTCTTGAAGAGCTAGCAGTGCT
CTTAAACAAACTGTATACAAAAGATTAATGGACAAATTGAGAAGTCTTAG
ATGATCAATGATAGTGGAATTTCAGGTTAAAGCTAGAACTTGCCTGTTGC
GTTAAGATTTTAAAAA

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCA
GAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCA
AATCAAAACAACCCTAAGATTCCACCTCACACCAGTCAGAATGTCTAAGA
TCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGA
ACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAA
ATCCGTCTGGCGGTTCCTCAGAAAATTGTTCATAGTACTACCGGAGGATC
CAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAG
AAGGACACATGCTCCACTATGTTCATAGCTGCATTATTTATAATAGCCAG
AAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAA
TGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAG
TGAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAA
GTGGATATTAGCCCAAAATCTAGGATACCCAATATATAAGATACNATTTC
CTAAACACATGAAACTCAAGAAAAATGAAGACTGAAGTGTGGACACTATG
CCTC

Query= MSMg01no450_j23.b1 MSMg01no450_j23.b1 CHROMAT_FILE:
MSMg01no450_j23.b1 PHD_FILE: MSMg01no450_j23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:37 2005
         (590 letters)



>mm_chr3_77804754_77805743
          Length = 990

 Score = 1064 bits (550), Expect = 0.0
 Identities = 576/594 (96%), Gaps = 18/594 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcatcttgtctccttgcctctagggacatggaagtccttcctgttctttctaaccagcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcatcttgtctccttgcctctagggacatggaagtccttcctgttctttctaaccagcaa 260

                                                                       
Query: 61  ttggcccatggcttttttactgacagatcaagagccaattggggaacaatactgtagcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggcccatggcttttttactgacagatcaagagccaattggggaacaatactgtagcat 320

                                                                       
Query: 121 cagaaccactcctaccgaccattactaatccccatgaccccaaatagtcactgattcact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagaaccactcctaccgaccattactaatccccatgaccccaaatagtcactgattcact 380

                                                                       
Query: 181 atgtcttccttactgtcccaagtctatgtcatagtattttccttcacattatttccactt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtcttccttactgtcccaagtctatgtcatagtattttccttcacattatttccactt 440

                                                                       
Query: 241 cccactctccctc----tttttcctcctcctcctcctcttcctccttctctttttccttt 296
           |||||||||||||    |    ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccactctccctccagct----cctcctcctcctcctcttcctccttctctttttccttt 496

                                                                       
Query: 297 ttttcttcttcttccacccctctcacatcatgcataaccagtactgttcacatactcttt 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ttttcttcttcttccacccctctcacatcatgcataaccagtactgttcacatactcttt 556

                                                                       
Query: 357 aatgcctggtcttctactgaattctttttttttttaacatgtatttatttatttatttat 416
           |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||
Sbjct: 557 aatgcctggtcttctactgaattcttttttttt--aacatgtatttatttatttatttat 614

                                                                       
Query: 417 ttatttatttatttatttatttatttatttatttaatgtatgtgaatacactgtcactct 476
           |||||||||||||||||||||||||||        |||||||||||||||||||||||||
Sbjct: 615 ttatttatttatttatttatttattta--------atgtatgtgaatacactgtcactct 666

                                                                       
Query: 477 cttcagacacactagaagaaggcatcagatacctttacagataggtgtgagccaccatgt 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 cttcagacacactagaagaaggcatcagatacctttacagataggtgtgagccaccatgt 726

                                                                 
Query: 537 ggttgcttggaattgaactcaggacctcttgaagagctagcagtgctcttaaac 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ggttgcttggaattgaactcaggacctcttgaagagctagcagtgctcttaaac 780


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space:   568400
Effective search space used:   568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)