TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTCGAGGCTGACTGACTTCTTACTTCTTTATGAACTCGAACCCT
TTCGTTAGGCTCCAATTATATGTGCGTCGCTAAATGATTATTCCTCGTTA
TTATTGGGTATGAAAGATGGACTGCTTCTTTTACCTATCCCTAGATGATG
TATACATGCATGTCCATTCTACCTCAACCCTAGTGCTATTTTGAGGCATT
TCTGTATAGGACTGCAGGTATTATCCTGTTGCTGTTTTTCCTGAGTGTCC
ATTTTGTAAGAGTTCATTTTGTATGAGTTCATGGACACACAGACACACAC
TGGCACACACACACACATATACGCACTTACAGACACACAGACACACAGAC
ACACACACAGATAGAGAGGAAGAGAGAGAGAGAGACAGAGAGAGATCCTA
TACACACAGCAAGCAGGAAGGACAAGACATAAAAGGATGGCTGAGATGAT
ATTAATTAGACATGGGGCAAACAACAGCCCTAAGGACTCTAACTGTTTTT
ACTTANGGAAGTGAACTGTTTGGACTAATTGCTGCTCAGCTTCTGTAGGA
AAGCCCCACTTGAGTAGAATCTCATCAACTGCAGAGGAGCTAGACTGGTA
TTGTAGAAAAACTAGTCTTAATATAAATATTTTATTTTTAATAAATATAC
CTTTATTGCATAGGTTTCAAAATTTCCTTAACACATGCATGTTGTTTCAC
TCTATTTGATGTAATATATAAAGGAGCCCACCTGTTTCTTAGGGAAAA

CGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXACTCTCTAGACCAATGCTGGACTCCTG
CTTACATATCTGCCTACCTCTACTTCCCATGTGCTGCTATTCACGGTGTG
CACCAGCTCTGCTCAGCGGACCCCTTGTTCTTAAATAATAGCTCTGAAAA
GATCAAAAAAGATCTCACACAAGTGAATGCTCATCTTGGGGATATGGTCT
CTCCGCTCAGTCGTGATCTCTTGAATAAAGTTTGATCAGCTTCATTCTCT
GCTTTTGTGTCCTTGCTTGCTTTAAAAGGCATGTAGGGGTTGATTAGCTT
GGGGTCGCTAGGCCAAATGTACACAATACTTCAGAAAAGACTTCCAGCTG
AGTCCTTCCACTCGCCTGCAGTTTCTAGGGAGCAGCGCCTAGCTCTTACT
ATAGCATGAACTGTTGAATATAAATGAGTAGAAACTGGACTAGATTTTCA
CAGACAAATTCAAGCTCATTAGACATGTTTTTCCATATATGGCACTACAC
CTGAAATCTTTTCATAAGATGTGCACAAGTCTTCCTTTACCTAATAAGAA
CCGCATATTGAGAAGTTTATATTTTCAGAACCACATATGTCTCACCGTCA
TTCTATGGCTGTTAGCACCTGCATTCTCTCNAGCAGCTTTGTGACTCAGC
GCAATGTGGCGCATTTCTTTGATCCACCCCTTCGGNACTTCGCTTAAAGC
CATGATCTTGANATGGACTGTCTCAAGACCAACTATGAAACAG

Query= MSMg01no451_n18.b1 MSMg01no451_n18.b1 CHROMAT_FILE:
MSMg01no451_n18.b1 PHD_FILE: MSMg01no451_n18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:15 2005
         (481 letters)



>mm_chr3_42711097_42711977
          Length = 881

 Score =  816 bits (422), Expect = 0.0
 Identities = 467/497 (93%), Gaps = 24/497 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcttcttttacctatccctagatgatgtatacatgcatgtccattctacctcaaccctag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gcttcttttacctatccctagatgatgtatacatgcatgtccattctacctcaaccctag 252

                                                                       
Query: 61  tgctattttgaggcatttctgtataggactgcaggtattatcctgttgctgtttttcctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tgctattttgaggcatttctgtataggactgcaggtattatcctgttgctgtttttcctg 312

                                                                       
Query: 121 agtgtccattttgtaagagttcattttgtatgagttcatggacacacagacacacactgg 180
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 agtggccattttgtaagagttcattttgtatgagttcatggacacacagacacacactgg 372

                                                                       
Query: 181 cacacacacacacatatacgcacttacagacacacagacacacagacacacacacagata 240
           |||||||||||||||||||||||||||||||||||||||||| |        ||||||||
Sbjct: 373 cacacacacacacatatacgcacttacagacacacagacacata--------cacagata 424

                                                                       
Query: 241 gagaggaagagagagagaga----------------gacagagagagatcctatacacac 284
           ||||||||||||||||||||                ||||||||||||||||||||||||
Sbjct: 425 gagaggaagagagagagagacagagagacagagagagacagagagagatcctatacacac 484

                                                                       
Query: 285 agcaagcaggaaggacaagacataaaaggatggctgagatgatattaattagacatgggg 344
           || ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 485 agtaagcatgaaggacaagacataaatggatggctgagatgatattaattagacatgggg 544

                                                                       
Query: 345 caaacaacagccctaaggactctaactgtttttacttanggaagtgaactgtttggacta 404
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 545 caaacaacagccctaaggactctaactgtttttacttagggaagtgaactgtttggacta 604

                                                                       
Query: 405 attgctgctcagcttctgtaggaaagccccacttgagtagaatctcatcaactgcagagg 464
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 attgctgctcagcttctgtaggaaagccccacttgagtagaatctcatcaactgcagagg 664

                            
Query: 465 agctagactggtattgt 481
           |||||||||||||||||
Sbjct: 665 agctagactggtattgt 681


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space:   410241
Effective search space used:   410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)