Query= MSMg01no452_d10.b1 MSMg01no452_d10.b1 CHROMAT_FILE:
MSMg01no452_d10.b1 PHD_FILE: MSMg01no452_d10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:42 2005
(698 letters)
>mm_chr3_45010947_45012044
Length = 1098
Score = 1303 bits (674), Expect = 0.0
Identities = 689/694 (99%)
Strand = Plus / Plus
Query: 5 gaattcatgtctgacattctcttagaaaaacatacagcacaaatattcagaatattgtta 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgtctgaaattctcttagaaaaacatacagcacaaatattcagaatattgtta 264
Query: 65 gagaatatgctgttttgggaatgtggtggttttaggttctaaaaatttgtatgacttctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gagaatatgctgttttgggaatgtggtggttttaggttctaaaaatttgtatgacttctt 324
Query: 125 taggcttgggttgctgtctgtttccagtaccaggaactgcctctgtttggtcttacatcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taggcttgggttgctgtctgtttccagtaccaggaactgcctctgtttggtcttacatcc 384
Query: 185 tattagaggttgacactactgccatgttagggttattattccttgcttatcattgtgatt 244
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 385 tattagaggttgacactactgccatgttagggttattattccatgcttatcattgtgatt 444
Query: 245 catcggcagcacagctggataggtctgttagttacctcctccattagaatttttttggta 304
|||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 445 catcggcagcacagctggataggtctgttagttacctcctccattaaaattttcttggta 504
Query: 305 acttctgatatggtcaccagtcctcaaggaggaggcattcaggtcagatccaggcaggag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acttctgatatggtcaccagtcctcaaggaggaggcattcaggtcagatccaggcaggag 564
Query: 365 catctgggcccagtttctaaagcaaagagtgtcttcatcaatagtgtgtttatatttttc 424
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 565 catctgggcccagtttctaaagcaaagagtgtcttcataaatagtgtgtttatatttttc 624
Query: 425 ttagatggtctttggcatcttaattgagcattatctgtacagatgagagaatttaaatta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttagatggtctttggcatcttaattgagcattatctgtacagatgagagaatttaaatta 684
Query: 485 aattatgtatgtatatttgtacatagacttacctgcattctgtttgtactgtgggttgtt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aattatgtatgtatatttgtacatagacttacctgcattctgtttgtactgtgggttgtt 744
Query: 545 tgtttttgttttttgttatttgtctttatgagcttttggatatctttgctcttagtttac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgtttttgttttttgttatttgtctttatgagcttttggatatctttgctcttagtttac 804
Query: 605 actcatcttttctgttttttatctgtctcaactctttgtaactacatcccttccactttt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 actcatcttttctgttttttatctgtctcaactctttgtaactacatcccttccactttt 864
Query: 665 cactaccctagtcaaataatttgtactattcacc 698
||||||||||||||||||||||||||||||||||
Sbjct: 865 cactaccctagtcaaataatttgtactattcacc 898
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1098
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1088
Effective search space: 748544
Effective search space used: 748544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_d10.g1 MSMg01no452_d10.g1 CHROMAT_FILE:
MSMg01no452_d10.g1 PHD_FILE: MSMg01no452_d10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:43 2005
(550 letters)
>mm_chr3_45162934_45163883
Length = 950
Score = 1036 bits (536), Expect = 0.0
Identities = 545/548 (99%), Gaps = 1/548 (0%)
Strand = Plus / Minus
Query: 1 tctttaaaatttaaggagtgtgatttcttttttctttcatttttttctattgagcacagt 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 tctttaagatttaaggagtgtgatttcttttttctttcatttttttctattgagcacagt 645
Query: 61 tattgtggtgcattttataaaaaatatttgtaacctcattgaagaaattccacatcccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tattgtggtgcattttataaaaaatatttgtaacctcattgaagaaattccacatcccat 585
Query: 121 gatgataaagaggacttctggacagatcctgagtgatgtggcagagcatatgtgcaccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gatgataaagaggacttctggacagatcctgagtgatgtggcagagcatatgtgcaccta 525
Query: 181 cctgcctaaaggttttcattagcatcaaatagatttctgtcttttttaaacactcttagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cctgcctaaaggttttcattagcatcaaatagatttctgtcttttttaaacactcttagg 465
Query: 241 gtttttctgttcagtatagctaagctaatctgattgcttacatagatttggatcagatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gtttttctgttcagtatagctaagctaatctgattgcttacatagatttggatcagatat 405
Query: 301 ctcttatgaatctagtcctgtattacaaactgctagttaatactaaaaatgaacctacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ctcttatgaatctagtcctgtattacaaactgctagttaatactaaaaatgaacctacag 345
Query: 361 cctatcttgtcagaaaccatttctaactttgccttccctaaacttctctttccaacatgg 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 344 cctatcttgtcagaaaccatttccaactttgccttccctaaacttctctttccaacatgg 285
Query: 421 tgattggcatctgacatgcatctccttatgtccttaaaacctattacctagctattttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tgattggcatctgacatgcatctccttatgtccttaaaacctattacctagctattttta 225
Query: 481 aaattatgaatgtgtatatatacatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 aaattatgaatgtgtatatatacatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 165
Query: 541 t-tgtgtg 547
| ||||||
Sbjct: 164 tgtgtgtg 157
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
