CCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCATGAAATTAGATACCAACAACACAATTAATCCAATTTTAAAAA
CCTAAGAAAGTAAATAAGAAGGAAGGCCCAACTGAGGATGGTTAATTCAT
CCTTAGAAGGGTGAACATGGGAGGACCTAGGTGGGAGAGAGGAAGAGGGG
ACAGGTATGATGAAAGACAGGAGAGATACCCAGAAGGCCAGGTAAATGTA
TCAAAACTGCATCTGGGACTGTGTGTGGCAGGGGGTAGGGGGGCGGGATC
TCTAAGGCCCATAGACTTCAAATGGGGGCAGATCCCAGGTCTCAGTGTGG
GTGGCCTTAATCTTTTAGCCCAATAGTGAGGGTAGGACAGACAGGAACCT
AGGAGAAGGATGGGGATATGAATCTTTATATATTTTTCCCCAAAATGGTC
CTGTCTAAAAGAAATTCAGAGACAAAATGAAGCAGATACTGAAATTTTGT
CCAACCAGTGACCTGCCACATTCAGGAACCATCCTAAGGGTTCCTGACAC
TATTACTTATGCTATGTTGTGCTTACAGACAGAAGTCTAGTATGTCTGAT
CTCTGAGATGCTCTATCAAGCTTTGGACTGAGACAGATGCAGATACTCAC
AGTCGATCATGGAATGGAGGTCGGGAAATCTATGGAAACTTTAGGGCAAG
AATTGAACGAACTGAAAGGGATGGAAACCTCACAGGAAGACCAGTAGTGT
CAACTAACATT

NCTATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTACCCATGCCCTGTCATCAGTTATC
AGTCAACAGAATGCACACAGGATTTCTCAAAATACAGTATATCAGTGGCA
TTTTGTCACTTGAGTTTTCTTCTTCTAAAATAAAACTTTGTCATGTCCAG
TTTGTATAAAACTAACCAGCACAGAACGATATATGAGGTTAGAGAAAACT
TACATGGGAGGTACTGGAGATAGGAAAATAGAAAAAAAAAGTAATTTTGT
TTTTGATTGTATTGAAATTTATTGATTTAAAATTTCAAATGTATTTGATA
TTTTTAATAAATCTTACTTTAAATAATGAAAACTTAATTGACTGTTGGAA
CTTGCATATCTGTCTGATATCGNAAGCCTGATAGGTTTACCCAGATGTTT
GCTTTACTGAATCCAAATCATATTAGTTAGTTCTTGATACTGGTTCTGAC
TTACATTCCTAAGTTATAAAATAGTCCAGATAAACTGTGAAAATGGGAGC
AATAATTTAAGAATGCATTACAAAAAGCTTAGAGCTTAAGGTAGTTTTGT
GACAGAGTATGGAAAGTATACATTTGAAAGATGTTACAGAATAAAAGCCT
TAAACATTTATAATAAAATGTTTTATTTTGTGCAATTTCCAATACTAATC
ATCTTATTATAAGGAACTTACATATAAAGATATAACACAGTCCAATTAAG
GAAGATGCTCA

Query= MSMg01no452_n03.g1 MSMg01no452_n03.g1 CHROMAT_FILE:
MSMg01no452_n03.g1 PHD_FILE: MSMg01no452_n03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:30 2005
         (672 letters)



>mm_chr3_43674503_43675574
          Length = 1072

 Score = 1015 bits (525), Expect = 0.0
 Identities = 558/570 (97%), Gaps = 3/570 (0%)
 Strand = Plus / Minus

                                                                        
Query: 106  taaaactttgtcatgtccagtttgtataaaactaaccagcacagaac--gatatatgagg 163
            |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 1072 taaaactttgtcatgtccagtttgtataaaactaaccagcacagaacatgatatatgagg 1013

                                                                        
Query: 164  ttagagaaaacttacatgggaggtactggagataggaaaatag-aaaaaaaaagtaattt 222
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1012 ttagagaaaacttacatgggaggtactggagataggaaaatagaaaaaaaaaagtaattt 953

                                                                        
Query: 223  tgtttttgattgtattgaaatttattgatttaaaatttcaaatgtatttgatatttttaa 282
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 952  tgtttttgattgtattgaaatttattgatttaaattttcaaatgtatttgatatttttaa 893

                                                                        
Query: 283  taaatcttactttaaataatgaaaacttaattgactgttggaacttgcatatctgtctga 342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 892  taaatcttactttaaataatgaaaacttaattgactgttggaacttgcatatctgtctgc 833

                                                                        
Query: 343  tatcgnaagcctgataggtttacccagatgtttgctttactgaatccaaatcatattagt 402
            ||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832  tattgtaagcctggtaggtttacccagatgtttgctttactgaatccaaatcatattagt 773

                                                                        
Query: 403  tagttcttgatactggttctgacttacattcctaagttataaaatagtccagataaactg 462
            |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 772  tagttcttgatactggttctgacttacattcctaagttataaaacagtcaagataaactg 713

                                                                        
Query: 463  tgaaaatgggagcaataatttaagaatgcattacaaaaagcttagagcttaaggtagttt 522
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 712  tgaaaatgggagcaataatttaagaatgcattacaataagcttagagcttaaggtagttt 653

                                                                        
Query: 523  tgtgacagagtatggaaagtatacatttgaaagatgttacagaataaaagccttaaacat 582
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652  tgtgacagagtatggaaagtatacatttgaaagatgttacagaataaaagccttaaacat 593

                                                                        
Query: 583  ttataataaaatgttttattttgtgcaatttccaatactaatcatcttattataaggaac 642
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  ttataataaaatgttttattttgtgcaatttccaatactaatcatcttattataaggaac 533

                                          
Query: 643  ttacatataaagatataacacagtccaatt 672
            ||||||||||||||||| ||||||||||||
Sbjct: 532  ttacatataaagatatagcacagtccaatt 503


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space:   703044
Effective search space used:   703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)