CTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TAACCCTCTATGCTCTGCGCTCTGGGCCATGGTCCTACCCTATGCTCTTA
GTAGAATCCCTACATCATAACATCACACCACACACACCCTGGCATCACCC
AGGCCTGCAGATCCAGGAGCAAAAGTAGAGTTGCTTCTTCCATCTCCTTC
ACAGAAGAGCATCAGGGCTAGTCATTCCAATGCTTATTTCATGCCCTGTC
AACACCGGCTCACTCTTATCTCCATTAGCCACGTATTGGACTGAATCAGG
GTATCCCATTAAAGGGGGCAGAGGGAGTAGGGGAAGGAGCCAGACTGACA
AACGCATAGAAGGAATGCTGGATGCAGATATTCATCATAAGTGAGCAACA
GCAGCCTTAAAGGGCTCCCAGTGTGATCCAATTAGCTCTGGGCGAGTCCT
CCTGTGTTAGCTGCTGCTCTACGGAGTCAGAAATGCACGGGCTGTTCAGG
CGGCCTTGACACTTCTTCCTGTACCTCGAGCGAGCGGACGCCAACAGTTA
ACTTAATGTGAGGGTGTGGCTTGCCAGTAAATTACTTCAAATTTAGTGAC
ACATCAATAATGCCCAGAAGCTACATGCACTGCAGAAGTGAAGTCTGGCA
TGCTCCCTCCCCCACCCAAACACACACAACACAGTATCCTAAGCTGTGCC
CAGTAAGGGAGGCTGCTGACTTATATTTGTGTGTGTGTGTGTGTGTGTGT
GTGTGGTGTGNNNNNNTNTGTNTNTN

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTAAAGTTCTAAACACGGGAAGGCAGA
GCAGAAGCAAAAATGCTCAACACTGTTCCAAACAAAATCCCAGCAGTTAC
TCTGCAGACACTAACAAATGCTCCAACATTTAAATGTTACGGTAGAGACT
TCAAAGGGCCCATATAATACTGAACAACCTGGAAAGATTGACACTAACCT
ATCCTGAAGTCTTTTCACAAAGTTACAGCCATCAAGAGAGCAATTGGGGA
ACAGATAGCGCAACAGGACTGAGGACCCAGAAATGGACCAACATAAATGC
AGTCAACAGATCTTTGACAGAGATACAAAGAAAATATAATAGAGAAAAGT
TAGTCTCCTGTAGATGGTACCACAGCACCTGAACCTCTACATCAGCATCA
ACATCATCACTCAGAGACCTTACACTCTTTTCAAAAATTATCTTAAAGCA
GACTGCAAACACACAAGAAAAAAACCTAAGCAGATAACCTTGACTGTAGT
TACAACATGAAAGGCATTGTCTATGAATGAAGTAATAGAGAAGATGCACA
TCATTAAAATTAAGCAGGTTCTCTGAAATACACTATGACTAGAATAAGAA
GACACACCACAAACAAGCCAAAAATACTTGTAAAATATTAACAAATAACT
TTTATTTTTAAAAAATCCATAAAACTCTTGAAAAAAACATTGCTAAGAAA
ACAGTCTAGCCCCAGTCACTGAGCCGCCGCCAGGACTC

Query= MSMg01no453_n21.b1 MSMg01no453_n21.b1 CHROMAT_FILE:
MSMg01no453_n21.b1 PHD_FILE: MSMg01no453_n21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:52 2005
         (655 letters)



>mm_chr3_84539199_84540254
          Length = 1056

 Score = 1230 bits (636), Expect = 0.0
 Identities = 648/652 (99%), Gaps = 1/652 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaatt-aaccctctatgctctgcgctctgggccatggtcctaccctatgctcttagtaga 63
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaccctctatgctctgcgctctgggccatggtcctaccctatgctcttagtaga 264

                                                                       
Query: 64  atccctacatcataacatcacaccacacacaccctggcatcacccaggcctgcagatcca 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atccctacatcataacatcacaccacacacaccctggcatcacccaggcctgcagatcca 324

                                                                       
Query: 124 ggagcaaaagtagagttgcttcttccatctccttcacagaagagcatcagggctagtcat 183
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggagcaaaagtagagttgtttcttccatctccttcacagaagagcatcagggctagtcat 384

                                                                       
Query: 184 tccaatgcttatttcatgccctgtcaacaccggctcactcttatctccattagccacgta 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tccaatgcttatttcatgccctgtcaacaccggctcactcttatctccattagccacgta 444

                                                                       
Query: 244 ttggactgaatcagggtatcccattaaagggggcagagggagtaggggaaggagccagac 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttggactgaatcagggtatcccattaaagggggcagagggagtaggggaaggagccagac 504

                                                                       
Query: 304 tgacaaacgcatagaaggaatgctggatgcagatattcatcataagtgagcaacagcagc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgacaaacgcatagaaggaatgctggatgcagatattcatcataagtgagcaacagcagc 564

                                                                       
Query: 364 cttaaagggctcccagtgtgatccaattagctctgggcgagtcctcctgtgttagctgct 423
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 565 cttaaagggctcccagtgtgatccaattagctccgggcgagtcctcctgtgttagctgct 624

                                                                       
Query: 424 gctctacggagtcagaaatgcacgggctgttcaggcggccttgacacttcttcctgtacc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gctctacggagtcagaaatgcacgggctgttcaggcggccttgacacttcttcctgtacc 684

                                                                       
Query: 484 tcgagcgagcggacgccaacagttaacttaatgtgagggtgtggcttgccagtaaattac 543
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttgagcgagcggacgccaacagttaacttaatgtgagggtgtggcttgccagtaaattac 744

                                                                       
Query: 544 ttcaaatttagtgacacatcaataatgcccagaagctacatgcactgcagaagtgaagtc 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttcaaatttagtgacacatcaataatgcccagaagctacatgcactgcagaagtgaagtc 804

                                                               
Query: 604 tggcatgctccctcccccacccaaacacacacaacacagtatcctaagctgt 655
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tggcatgctccctcccccacccaaacacacacaacacagtatcctaagctgt 856


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1056
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1046
Effective search space:   674670
Effective search space used:   674670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)