CGCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCACTCTTCTCGTACAGGTTTTCATTATTTCAGTCTAGACCT
TACATGTTTGTCTTATGCCTTCTAGCCATTTTGTCAGAGTTAAGCAAAAT
TAGAGCTGAAAAGTTATGCTTTTCTTGCCCTCCCCGCAGACAGCATCACT
TGTGTCCTTCACTGGCCTCAAATTGATTGTGTCCGTAACCTATACAGTTT
TATGCTAATACTCGATACATCATCAACTTTAGCCTACAAAGACTTGACAA
CAATAATAAGATGCTTTAAGTATCACCATTTGGTGAGTCTCGTAGGTGCT
TTGTTTCACCTTAGATATTTCTGCTGCTTCTAACTTAAGAAGACTTACTC
TGCTTCTGATTGTGTAAAACATCAGACATTTATTCAATAAATTTATTGAG
TGTCTACATGCTGGAAAATATGATAACTTGTCTTACAAAAAAGAAAGCAA
GCAAAACAGATGTATTTTTCCATAATGGAGTTGTAGTGTTGTCTTCTATT
GAGAAGCAATGGATTTGGACATAAAGAAAACTGCTCTGTTGAATACTTTA
AGGACATAGCTGCTGCTTCTGCAGCGAATTTGCAGTGACTTTTTAGATTA
CTTCTGGGAGCAGTCAAGGCTTTTGTGTTTTTTAGCAATCAAAGGCAAAG
CCTGTGATTTCCGACTCCTGACATTTGTTACCCA

TTTCGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGTGTTCTCGATGTGTCGGGCTG
CATGGGTGATGGAAGAGCCAGCTTTCAGAGTAAATCACTCTTCTGTTGGC
TTTCTTGACAGACACTAGAAAAAATCTGATAGCCTTGCTGATGTTTTTCA
ATTACCTTAAGTGCAAGGGAAGGCCTTAGTAGGAGAACTATGAAGCAAAT
GATTTGGATGCGATTAAGATAATATTCAAAGGGCTGGAGGGATGACTCCA
TAGCTAAAACTGCTTACTGCCAAGTGGATGGTTCACCAGGATCTAACACT
CCAGCTCCAGGGGGTCCAGGGTCCTCTTCTGGCTTCCTCAGGTGCTCACA
CATACATATACACAGATACACACACACACACACACACACACACACACTTT
CACATACATAGTTACAGATTCACTCACACATATACACACACAATTTCCAT
ACACGCCCATTTTCACTCACACACACACACATATTCATATACATTTCCCC
CTCCCCAATCCTTTCTTCTCTTCCACCCTTTCTCCCTGTGTATTCTTACC
TTGCCCCCTTTCCCTTTTTTTTTTTTCCTTCTCTCTCCCTTTTCCTATAC
CGTGCTTTACATTATTCCCCCCACTTATGCTATAACGCTCGTATTAGTAA
CTTTATTTTTTTTACTATCTTTTACCCCCCACCCTTATTTTATTTTATTC
TCCCCACC

Query= MSMg01no454_e02.b1 MSMg01no454_e02.b1 CHROMAT_FILE:
MSMg01no454_e02.b1 PHD_FILE: MSMg01no454_e02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:23 2005
         (538 letters)



>mm_chr3_152108185_152109122
          Length = 938

 Score =  986 bits (510), Expect = 0.0
 Identities = 528/534 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcactcttctcgtacaggttttcattatttcagtctagaccttacatgtttgtctt 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactcttcttgtacaggttttcattatttcagtctagaccttacatgtttgtctt 264

                                                                       
Query: 65  atgccttctagccattttgtcagagttaagcaaaattagagctgaaaagttatgcttttc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 265 atgccttctagccattttgtcagagttaagcaaaattagagctgaaaaggtatgcttttc 324

                                                                       
Query: 125 ttgccctccccgcagacagcatcacttgtgtccttcactggcctcaaattgattgtgtcc 184
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 325 ttgccctccccgcagacagcatcacttgtgtccttcactggcctcaaattgactgtgtcc 384

                                                                       
Query: 185 gtaacctatacagttttatgctaatactcgatacatcatcaactttagcctacaaagact 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtaacctatacagttttatgctaatactcgatacatcatcaactttagcctacaaagact 444

                                                                       
Query: 245 tgacaacaataataagatgctttaagtatcaccatttggtgagtctcgtaggtgctttgt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgacaacaataataagatgctttaagtatcaccatttggtgagtctcgtaggtgctttgt 504

                                                                       
Query: 305 ttcaccttagatatttctgctgcttctaacttaagaagacttactctgcttctgattgtg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttcaccttagatatttctgctgcttctaacttaagaagacttactctgcttctgattgtg 564

                                                                       
Query: 365 taaaacatcagacatttattcaataaatttattgagtgtctacatgctggaaaatatgat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taaaacatcagacatttattcaataaatttattgagtgtctacatgctggaaaatatgat 624

                                                                       
Query: 425 aacttgtcttacaaaaaagaaagcaagcaaaacagatgtatttttccataatggagttgt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aacttgtcttacaaaaaagaaagcaagcaaaacagatgtatttttccataatggagttgt 684

                                                                 
Query: 485 agtgttgtcttctattgagaagcaatggatttggacataaagaaaactgctctg 538
           ||||||||  ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 685 agtgttgtagtctattgagaagcaatgtatttggacataaagaaaactgctctg 738


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space:   489984
Effective search space used:   489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no454_e02.g1 MSMg01no454_e02.g1 CHROMAT_FILE:
MSMg01no454_e02.g1 PHD_FILE: MSMg01no454_e02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:24 2005
         (368 letters)



>mm_chr3_152268444_152269211
          Length = 768

 Score =  698 bits (361), Expect = 0.0
 Identities = 364/365 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtgttctcgatgtgtcgggctgcatgggtgatggaagagccagctttcagagtaaatca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 agtgttctcgatgtgtcgggctgcatgggtgatggaagagccagctttcagagtaaatca 390

                                                                       
Query: 61  ctcttctgttggctttcttgacagacactagaaaaaatctgatagccttgctgatgtttt 120
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 389 ctcttctgttggctttcttgacagacactagaaaaaatccgatagccttgctgatgtttt 330

                                                                       
Query: 121 tcaattaccttaagtgcaagggaaggccttagtaggagaactatgaagcaaatgatttgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tcaattaccttaagtgcaagggaaggccttagtaggagaactatgaagcaaatgatttgg 270

                                                                       
Query: 181 atgcgattaagataatattcaaagggctggagggatgactccatagctaaaactgcttac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 atgcgattaagataatattcaaagggctggagggatgactccatagctaaaactgcttac 210

                                                                       
Query: 241 tgccaagtggatggttcaccaggatctaacactccagctccagggggtccagggtcctct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tgccaagtggatggttcaccaggatctaacactccagctccagggggtccagggtcctct 150

                                                                       
Query: 301 tctggcttcctcaggtgctcacacatacatatacacagatacacacacacacacacacac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tctggcttcctcaggtgctcacacatacatatacacagatacacacacacacacacacac 90

                
Query: 361 acaca 365
           |||||
Sbjct: 89  acaca 85


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space:   272481
Effective search space used:   272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)