NNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCAACCTTATCCTTTTGAATTATAGGTGCATATCCCTATATCT
GGTTGACTCAAGCTTTTTAATTTTTTAATTATTTATTTATGTATTTATTT
GCTTATGTGTGACTATATGTGCCATGGTGTACGAGTGGAGATCAGAGGAC
AATTTTGACGAGTAGATTCTTTTCCCCTCCCACGTACGTTTTGTGTATCT
AACTCAGGTTAGCTTAGCAGCAATCACCTTTCTTTTCTGAGCCATCTTTT
TTTTTTCTCCCCAGATTAAGCTCTTGATATATATCTTACTGATATAGAGA
AAACTTTCAAAGAAAACTGGAGATGGGCTGGTGAGATGGCACCATGGTTT
AAAGGCACTTCCAGTTTTGTAGGGAACCCAGTTTGGTTCCCAGGACTCAC
ATGGCATTCCCCAGCATCTTGAACTCCAGTTCCAGAGGGTCCAGTTCCTT
AGGGCCTCTGTGAGCACTGGACATGCACACAGTGAGTATATACACCTGCA
AACAACACACTCATAAAGTAAACATAAATAAATCCTAAAAAGAGAAAGAT
ATATAGCCCGTTTAACTATTTCCCACAGTCCAGCATGTTCCCAAATAACA
TTCCCCGTTGCTTGGTGGGACCCGTAGCTTATGAGGTAGAATCCCTGACG
GGGAACTTTGTGAATTTGCCCCGGCTTCATGTGCCTCTGGGG

NCCTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTTCCCAGCAAGGGCAGC
CATCTAAATGCTATTCAATCAGAATGCTAGCCTGTGCCTTCATGCTGAAC
ACTTTTTTTTTTATTTTGTAGTCACTGAGATGGAAGTTTCTGTGAGTCCA
ATATCATCAGAAGAGACATCAAACAAAAGTTGAGCAATACAGAAAACATG
TGACTACATAGTAGGAAGAAAAATTTAGATGTTCTTTCTTTCTAATTTTT
ACAATTTTACTAACAGCATCCTACCTCAAATAGGTGCTTGAATTGTTTGG
TGAAAGGAAGTGTTCATGGGTTGCTCTCTACACAACTTTCAAAATGCTTC
CCTATACCTTTAACTGTTAATTAGCTCAAGTCTTTGGTTCAGAAACCACA
GCTCTGTGCAGTGTGACCTCACTGGTATGGCATCTGAGCAATTATCTTTG
ANATAATGAGCCTTTTCATCCATAACAGAACAACAACTTCTCACTTGGAT
TGCAAAAGATCAAAGGTAATCTGCTGCACACCTAGGGGGCTGCCATCCCC
TCTGTAGCATAACCTTATTTTCCACTTATCCTTTCCCATCCCTGAAATAA
CTAAGGTGGGTCTCCCTATATATAACACCTTCTTCGGCGGTTTTTTTCTT
CTCCCCCTCCTTTCTCCTATTTGCAACCCCCATTTCGTTGNTACTTTTN

Query= MSMg01no454_f05.g1 MSMg01no454_f05.g1 CHROMAT_FILE:
MSMg01no454_f05.g1 PHD_FILE: MSMg01no454_f05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:29 2005
         (432 letters)



>mm_chr3_78595909_78596740
          Length = 832

 Score =  830 bits (429), Expect = 0.0
 Identities = 431/432 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttttcccagcaagggcagccatctaaatgctattcaatcagaatgctagcctgtgcctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttttcccagcaagggcagccatctaaatgctattcaatcagaatgctagcctgtgcctt 260

                                                                       
Query: 61  catgctgaacacttttttttttattttgtagtcactgagatggaagtttctgtgagtcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catgctgaacacttttttttttattttgtagtcactgagatggaagtttctgtgagtcca 320

                                                                       
Query: 121 atatcatcagaagagacatcaaacaaaagttgagcaatacagaaaacatgtgactacata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatcatcagaagagacatcaaacaaaagttgagcaatacagaaaacatgtgactacata 380

                                                                       
Query: 181 gtaggaagaaaaatttagatgttctttctttctaatttttacaattttactaacagcatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaggaagaaaaatttagatgttctttctttctaatttttacaattttactaacagcatc 440

                                                                       
Query: 241 ctacctcaaataggtgcttgaattgtttggtgaaaggaagtgttcatgggttgctctcta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctacctcaaataggtgcttgaattgtttggtgaaaggaagtgttcatgggttgctctcta 500

                                                                       
Query: 301 cacaactttcaaaatgcttccctatacctttaactgttaattagctcaagtctttggttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacaactttcaaaatgcttccctatacctttaactgttaattagctcaagtctttggttc 560

                                                                       
Query: 361 agaaaccacagctctgtgcagtgtgacctcactggtatggcatctgagcaattatctttg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaaaccacagctctgtgcagtgtgacctcactggtatggcatctgagcaattatctttg 620

                       
Query: 421 anataatgagcc 432
           | ||||||||||
Sbjct: 621 aaataatgagcc 632


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space:   348129
Effective search space used:   348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)