TGTCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGGATCCG
CGGAATTCACCCCTTTCTCTCCAACTTGCTCCATGACTCATTTTGGTCTG
GCTTCAGCTTCCCACTCCCTTTAAGTTGCTTTCAAATGACCCAACCCTGA
GTCCAGCTCTGAAATCACTGAAACCAAGGTATAGATAGCTGCAATCCCAC
CCCTTTGTAATGGATGTCCTTCCCGTAGCCTTCTGCTCAACTGCTACTAG
CTAGGAATAAAGACTTTACTTGATTAGCCCACCAGTTCTTCATTAGAAGT
ATTAAGTTATATGGCTCAATGAAACACTGAGTCAAAAACAAAACAAAACA
AAACAAACAAAGCAAAACAAAACAAACAAAAAACAACAAGAAGCAAGAAT
TGTACTTCTTGATGAAACCCAAATGGCATTTAGAGTGCACATTCTATTTA
TATTAATTCCCACCTCTGTCACACAGTCAAATGTTTTTCTCTTAAGATCT
AGCAAAGTCAAGTTCTGTCAGAGGGTTACAAATATTAGGAAAGAGTAATA
GTAACGTATTTTATCCCCCATGTCCTTTAAATATGAAAGATGTCCTCCCC
GTTGCTCTTGGGTTTATCCATTTACCTTAAATAATGACACTGGGTTTGCC
CTCCTAAATTTGCCACGTACTGAAAAAATCTCCCCTAATTTTTTCATTGG
GCACAGGTTTCCAACTGTTTTTTAACCCCTCCTATCCTCTTCTAAAATAA
AATTAATCG

NTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXAACATGACGGGGAGG
TGAACTATAGAAGTGACAGAAAAATTCTCTTAATTTGTGTATTCTTTATT
GAATCTATTTCTAACTTCATGTCTTGAATGGTTTTCTTAATTTCCTTACA
CCTTTGTTTGTGTTTTCCTGGATTTCTTTAAAGGATTTATTAATTTCCTT
TTTAAGCACTTTCATCATATTCATAAAGGTTGTTTTAAGGTCTTTTTCTT
GTGCTTGAAATATGATTCAGGGCATGCTATTGTAAGATAGCTGAGTTTTA
CTGAAGACATATTATTCGTGCTTTTATTAACTGTGTTTTTGCACAGGTGT
CTGGGTGTCTGGGTTTGTGATAACCAGAGGTCTAGGTGCCTATTTCTGGG
TTTATCTTTGTTTAGGAGGATAATTTTGCCCCTTTGGTTATCTGTTGATT
TCTGGGCTTTTTCTCTAACATACATCTTTTTCTCTTCTTTCTTTTTTTCT
CCCTCCCCCTTTTTATTCTTTTTTTTCTTATCTTCTTCCATTCCTCATAT
TTTTTCGCCCCCTCTTTTTTTTTCTTCCCTTTTTCTTCCTCTTCCTTTCT
CTTTCCTACTCTTCCTTTCCTCCTCCCCCCCCTCTTTTTACTTATCTCAC
AACTCGTGTTCCCTCTCCTCCTCCCCCCCCTTTTTTTTCACTCCTCCTCT
CCTCTCCCTTTTTTCCCCCCCCCTTCTCCCTTTCCCCTATTTAATACCCC
CTCCCCTTTTCTTATTTTATTTTTTG

Query= MSMg01no454_h03.b1 MSMg01no454_h03.b1 CHROMAT_FILE:
MSMg01no454_h03.b1 PHD_FILE: MSMg01no454_h03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:38 2005
         (450 letters)



>mm_chr3_79798121_79798970
          Length = 850

 Score =  791 bits (409), Expect = 0.0
 Identities = 435/445 (97%), Gaps = 5/445 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattcacccctttctctccaacttgctccatgactcattttggtctggcttcagcttcc 65
           ||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 206 gaattcaccccattatctccaacttgctccatgactcattttggtttggcttcagcttcc 265

                                                                       
Query: 66  cactccctttaagttgctttcaaatgacccaaccctgagtccagctctgaaatcactgaa 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cactccctttaagttgctttcaaatgacccaaccctgagtccagctctgaaatcactgaa 325

                                                                       
Query: 126 accaaggtatagatagctgcaatcccacccctttgtaatggatgtccttcccgtagcctt 185
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 326 accaaggtatagatagctgcaagcccacccctttgtaatggatgtccttcccgtagcctt 385

                                                                       
Query: 186 ctgctcaactgctactagctaggaataaagactttacttgattagcccaccagttcttca 245
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 386 ctgctcaactgctactagctaggaataaagactttacttgattagcccaccagttcgtca 445

                                                                       
Query: 246 ttagaagtattaagttatatggctcaatgaaacactgagtcaaaaacaaaacaaaacaaa 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttagaagtattaagttatatggctcaatgaaacactgagtcaaaaacaaaacaaaacaaa 505

                                                                       
Query: 306 acaaacaaagcaaaacaaaacaaacaaaaaacaacaagaagcaagaattgtacttcttga 365
            |||| |   ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 -caaa-a---caaaacaaaacaaacaaaaaacaacaagaagcaagaattgtacttcttga 560

                                                                       
Query: 366 tgaaacccaaatggcatttagagtgcacattctatttatattaattcccacctctgtcac 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgaaacccaaatggcatttagagtgcacattctatttatattaattcccacctctgtcac 620

                                    
Query: 426 acagtcaaatgtttttctcttaaga 450
           |||||||||||||||||||||||||
Sbjct: 621 acagtcaaatgtttttctcttaaga 645


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space:   369600
Effective search space used:   369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)