CTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAATTTTTCGTTGGCTTGTTATCTGTTCAACAAATGCACTTGTAT
CATAATTTAAATAAATAGTATAATGTCATGTTTTATAATGAGTCAAATTA
CATTTTTAAATGAAGATGTTTTAAAAGTAATATCCTAAACCATTGTTAAA
ATAATCATTTTGAAAAATAAAGCATACTTGGCATAATGGTTATTAGAACA
GATTCTTTTGCTAAAGGCATTCTACTATTGTAAACATCCATTTGAGTGAC
ATTACATATTTCATTGAAAATAACCCATTAATACTTGATTCTCACTTCTT
ATTATTTGGCTACTTACAAGTAAAGAGTAGTCCCAGTTTTTTGCTATTAC
TGCCTGTGTACATTTTTAAAAAACTATTCTGTTTATCTACAACACAGAAT
GCCCTTTCATCCTACCTCTAACTATGTAACTCCCAACCAGTTTCCAGTTG
CATATTAATTATTAATTGCTGTTTAGTACTGAACATTATCATAACACCAT
AGTCCATAGTTCACTCAGAATCCACATTGTTTTTCTTGCTTGTTTGTTCA
TGCTTCTAGCAATTGCATTAGGGAGAAAGAGAAGTCAAATTTTACACAGA
ATGTGGTTTCACAGAACGATCTCATAATTTTCTTCTTCCATGCAAAGGAA
ACACTCTGCTGAATATAGGTTCATAGTCTGGTTCCCTC

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACTATAAAGATTTTAAAAGCCAGAAG
AGCCTAGAGAAATGAACTGTAGGCTCTAAAAAATCGTAAATATCAGCCAA
GATTATTATACCCAGGAAAATATTCAATTATCATAAATGGAGTAATAAAA
TAGCCCACAATAAAATCAAATATGAACAATATCCTCAAATCTAGTTTGAT
ACATGGTGCTAGAAAAAAAAATCTCCGATACTTGGAAGTTAACTACTGTT
AGTGGCTGTTTAATAAATAGTTTTTCAGTTTTCCTCTTAACCCAGGTACC
TGTGAAATTATTGAGACTGAACTATTATATTTATTTTTACAAGCATTAAA
TGGCTGAACAACAATCCTCTGAGCTAATCTGGAATACCTCACAGTCAAAC
TTCCTGTGGTACTTGTATTTTAGTACTGATCTTGCTTTTGAGGCTCCAGT
TTTCATGATGTCTTCTTGACTCTCTCATTTTGGTGAATCCCTATTTACTT
TTTCTCTTTTTCCTCCCCTGAAGGGGAAGAAGTCCAATCATATTCTCTAC
TCAGTCACTGGGTGATTAGCTTTTTATTGGACTATTAGGGAATAATTGGG
GGGGGGGGATATGGTTTTTTNNNTTNTTTTGTTTTTTTTTTTTTNTTTTT
GTTTTNTGTTTTTTTTTTTNTTGTTTTTTGTTTTTTTTTGTTTTTTTTTT
G

Query= MSMg01no455_b21.b1 MSMg01no455_b21.b1 CHROMAT_FILE:
MSMg01no455_b21.b1 PHD_FILE: MSMg01no455_b21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:32 2005
         (579 letters)



>mm_chr3_110551819_110552797
          Length = 979

 Score = 1112 bits (575), Expect = 0.0
 Identities = 578/579 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tggcttgttatctgttcaacaaatgcacttgtatcataatttaaataaatagtataatgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggcttgttatctgttcaacaaatgcacttgtatcataatttaaataaatagtataatgt 260

                                                                       
Query: 61  catgttttataatgagtcaaattacatttttaaatgaagatgttttaaaagtaatatcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catgttttataatgagtcaaattacatttttaaatgaagatgttttaaaagtaatatcct 320

                                                                       
Query: 121 aaaccattgttaaaataatcattttgaaaaataaagcatacttggcataatggttattag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaccattgttaaaataatcattttgaaaaataaagcatacttggcataatggttattag 380

                                                                       
Query: 181 aacagattcttttgctaaaggcattctactattgtaaacatccatttgagtgacattaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacagattcttttgctaaaggcattctactattgtaaacatccatttgagtgacattaca 440

                                                                       
Query: 241 tatttcattgaaaataacccattaatacttgattctcacttcttattatttggctactta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatttcattgaaaataacccattaatacttgattctcacttcttattatttggctactta 500

                                                                       
Query: 301 caagtaaagagtagtcccagttttttgctattactgcctgtgtacatttttaaaaaacta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caagtaaagagtagtcccagttttttgctattactgcctgtgtacatttttaaaaaacta 560

                                                                       
Query: 361 ttctgtttatctacaacacagaatgccctttcatcctacctctaactatgtaactcccaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctgtttatctacaacacagaatgccctttcatcctacctctaactatgtaactcccaa 620

                                                                       
Query: 421 ccagtttccagttgcatattaattattaattgctgtttagtactgaacattatcataaca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccagtttccagttgcatattaattattaattgctgtttagtactgaacattatcataaca 680

                                                                       
Query: 481 ccatagtccatagttcactcagaatccacattgtttttcttgcttgtttgttcatgcttc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccatagtccatagttcactcagaatccacattgtttttcttgcttgtttgttcatgcttc 740

                                                  
Query: 541 tagcaattgcattagggagaaagagaagtcaaattttac 579
           ||||||| |||||||||||||||||||||||||||||||
Sbjct: 741 tagcaatggcattagggagaaagagaagtcaaattttac 779


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space:   551361
Effective search space used:   551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)