Query= MSMg01no455_l12.b1 MSMg01no455_l12.b1 CHROMAT_FILE:
MSMg01no455_l12.b1 PHD_FILE: MSMg01no455_l12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:18 2005
(606 letters)
>mm_chr3_5407493_5408498
Length = 1006
Score = 777 bits (402), Expect = 0.0
Identities = 417/422 (98%)
Strand = Plus / Minus
Query: 185 cctgggcagtgctggtatactcctgtgatcccagtactttggaggtagaggcaggagaat 244
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1006 cctgggcagtgctggtatactcctgtgatcccagtactttggaggcagaggcaggagaat 947
Query: 245 ctctgtgagttcaagaccatctttatctatatagttagttacaggacagctaggattacc 304
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 ctctgtgagttcaataccatctttatctatatagttagttacaggacagctaggattacc 887
Query: 305 aaaagaaactctgtctcaaaaaatcaaatctatatctatcatatgtacatatacatacac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 aaaagaaactctgtctcaaaaaatcaaatctatatctatcatatgtacatatacatacac 827
Query: 365 atatacatacacatgtacatgtctcagaatgaaaacttaaatgcagtctttctattcaga 424
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 atatacatacacatgcacatgtctcagaatgaaaacttaaatgcagtctttctattcaga 767
Query: 425 gaataagcttattattgaggtgaaactaagtgtagttaagttaagtacatgggacaaaag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 gaataagcttattattgaggtgaaactaagtgtagttaagttaagtacatgggacaaaag 707
Query: 485 gacaaaaggtagtcatgccaaaattattatggtcttattcttacgtagactcacaccaaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gacaaaaggtagtcatgccaaaattattatggtcttattcttacgtagactcacaccaaa 647
Query: 545 tgtgcttctaaattaaaacgaaggaaggttctgtatccccatgtgagggcctgaaagtgt 604
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tgtgcttgtaaattaaaacaaaggaaggttctgtatccccatgtgagggcctgaaagtgt 587
Query: 605 gg 606
||
Sbjct: 586 gg 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_l12.g1 MSMg01no455_l12.g1 CHROMAT_FILE:
MSMg01no455_l12.g1 PHD_FILE: MSMg01no455_l12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:18 2005
(592 letters)
>mm_chr3_5347806_5348797
Length = 992
Score = 1145 bits (592), Expect = 0.0
Identities = 592/592 (100%)
Strand = Plus / Plus
Query: 1 tttttaaaatcaaaattataaaatacatcctgatggaatcatgagttgaggaagaccgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttttaaaatcaaaattataaaatacatcctgatggaatcatgagttgaggaagaccgtg 260
Query: 61 tcatattcataggacatgtgtttgcatcttctcgggtgcctctcctgcagaaggagattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcatattcataggacatgtgtttgcatcttctcgggtgcctctcctgcagaaggagattt 320
Query: 121 tgtttattcaaatggacatgtaaagaggagaggcacaatataaagtcgtcattctttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtttattcaaatggacatgtaaagaggagaggcacaatataaagtcgtcattctttcat 380
Query: 181 atttacaataagaatgtttcatttcttcttgtgtattgatgtcccaaggcagtgctccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttacaataagaatgtttcatttcttcttgtgtattgatgtcccaaggcagtgctccaa 440
Query: 241 atgaaaagataataacttatgaagaagtgtcaaaaactaattaagttttgtaagttgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaaaagataataacttatgaagaagtgtcaaaaactaattaagttttgtaagttgttt 500
Query: 301 ttccctctcgcaggatatatttttcatcacactgtccagtcacatgctgagattcttgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttccctctcgcaggatatatttttcatcacactgtccagtcacatgctgagattcttgct 560
Query: 361 aacattatcacatgccagtcacaccaagtctcagtggtgcctctccttctgtcattattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacattatcacatgccagtcacaccaagtctcagtggtgcctctccttctgtcattattt 620
Query: 421 tcagcatcaattaattttcttctgacctcgcctttagagaaggtatcagagaatcatcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcagcatcaattaattttcttctgacctcgcctttagagaaggtatcagagaatcatcag 680
Query: 481 tacacgctttgcagtctattttgaaggcattaggccactgtgtgcattcaaaaatggagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tacacgctttgcagtctattttgaaggcattaggccactgtgtgcattcaaaaatggagt 740
Query: 541 cagccaaacattatattttctcacctgcagggttgcctagtaacctgaatta 592
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cagccaaacattatattttctcacctgcagggttgcctagtaacctgaatta 792
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
